| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_1952 |
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| Symbol | |
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| ID | 6144049 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | + |
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| Start bp | 1972870 |
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| End bp | 1974840 |
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| Gene Length | 1971 bp |
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| Protein Length | 656 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 641616828 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_001744004 |
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| Protein GI | 170682916 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4771] Outer membrane receptor for ferrienterochelin and colicins |
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| TIGRFAM ID | [TIGR03304] outer membrane insertion C-terminal signal |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.446334 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 0.0364758 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGACTCA AAAAACGTTA TCTCTGCACA GCATTATCAC TTGCCTTTAC CCAGCAGGCC
GTAGCGGCTC AGGAGAGTGA CACGCTGACC GTATGGTCCA GTCCGGTATC ATCGACGACG
ACCACCGTTC TCGATCAACC CACCATGAAG GCCCTGGATA AACAGAATGT CGCTCAGGCA
TTAAGTGTCG TCCCCGGCGT GGTGCTGCAA AAGTCAGGTA GCCGCAACGA AGAACAGGTC
AAAGTTCGCG GCTTTGATAG TCGTCAGGTG CCAGTCTATT TCGAGGGTGT GCCCATTTAT
GTTCCCTATG ACGGCAACCT CGATCTGGCG CGGATTCTGA CCAACAATTT GGGGGCAGTT
GAAGTTTCCA AAGGGTATTC GTCGCTGCTT CAGGGGCCTA ATCAGATGGG CGGAGCCATT
AATATCACCA CCCAGAAGCC AACAAAACCT CTGGAAGCAA ATCTGGGATA TCGCCAGGGA
TGGAGCCGTA GCCAGGACAA TGCCTACGAT ATGCATGCTT CATTTGCCGC CAGCAGCGAT
CTGGGGTATT TGCAAGTCAG CGGTAGCCAG CTAAAGCAGG ATTTTCTCGG CCTGCCGCAT
GGTGTAAATA ATGATATTGC AGGCAAACAC GGCAAGATGA TTAATTCATC GGCTGATGAT
AAACGCGGCA TTGTGAAGCT CGGTTTTACA CCACGCGAAA ACGATGAATA CACATTGACT
TACATTAAGC AGGATGGTGA AAAAGATAAC CCGCCATACA GTGGAAATAG TGGTCAAAAA
TCACGCTACT GGCAGTGGCC AGAGTATGAC AAAGAAAGTT TTTATTATCA GGGAACGACC
CAACTAAACG ATCGTTTTAC CCTGAAAAGT CGGCTGTATC GCGACACCTT TGAAAATACG
CTAATGATGT ACAACTCGCT GGCTGATTTG AAAAATAAAA AAGGCAGCTA CAGCCATTAT
TCCGATTACA GCGACGGTGC CGGGTTACAA CTGGCAGCCG ATGTGCGTGA AAACGATCTG
CTGTCGTTTG CCGTTAACTG GAAAGATGAC GTACACCGGG AAAAAGGTGC GCCACACGCC
GCTTACGATC GCTATGAAGA TCGTACCTGG TCGCTCGCCA GTGAATATCA ATGGGCTGCT
GCCGATAATG TCGATGTCGT GGCTGGAATC AGCTATGACT GGCGCGATAG CGTAGAAGCG
AAAAAACATG AGAAAGATGG CAGTATCACC CATTATGACG ACAACAATCA GTCAGCTTTT
AACTGGCAGG TGATGGGGAA ATACCACTTT GCCAATGAAG ACACGCTGGC GCTTTCGTAC
TATGACCGCA CACGCTTTCC GACGCTGAAA GAACGCTATA CCACGTCCAA ACCTGCGTAT
AACCAGATAG CGATTGTTAA CCCGCAGCTC AAACCGGAAC GCGCGCGCGG GGTGGATTTA
ACCTGGAATG GTGCCTTCAC GCACGACTGG GGGTTTGAGG TCAGCGTTTA CTATAACCGG
GTGAGTGATG CCATCCTCTC GCACAATATC GATGCCGATA CCATTCAAAA TCAGAACAGC
GGCACGGTGG ATTACAGCGG TCTGGATGCC GGTATTAAGG GGAAAATCAG CAATATACTG
GATGTAGGAT TGAGCTACGC CCTGATCCAC GCTGACGCCA AACGCAAAGA CATCGGCAAG
ATAACCGATC TGCCAACGCA GACAATGACC GCATGGATGA CTCTCAAACC GTGGGAGCCG
TTAAGCGTAA CGCTGTCGGA AGAGGCGCGT TCCTCCAGCT ACAGCAACAG TGACGGTTCA
CAAAAAGCCG CCGGTTTTGC GGTGACCCAC ATTCGAGCCG ATTACACCTT AGGTCATGGC
TTCAGCGTCA ATGCGTCGGT CAATAACCTG TTTGATACCA AATATGCCTA CAGTGAAGGG
TTTATTGAAG AAGGTCGCAA TTTCTGGGCA GGTATCGCGT ATACGTTCTG A
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| Protein sequence | MRLKKRYLCT ALSLAFTQQA VAAQESDTLT VWSSPVSSTT TTVLDQPTMK ALDKQNVAQA
LSVVPGVVLQ KSGSRNEEQV KVRGFDSRQV PVYFEGVPIY VPYDGNLDLA RILTNNLGAV
EVSKGYSSLL QGPNQMGGAI NITTQKPTKP LEANLGYRQG WSRSQDNAYD MHASFAASSD
LGYLQVSGSQ LKQDFLGLPH GVNNDIAGKH GKMINSSADD KRGIVKLGFT PRENDEYTLT
YIKQDGEKDN PPYSGNSGQK SRYWQWPEYD KESFYYQGTT QLNDRFTLKS RLYRDTFENT
LMMYNSLADL KNKKGSYSHY SDYSDGAGLQ LAADVRENDL LSFAVNWKDD VHREKGAPHA
AYDRYEDRTW SLASEYQWAA ADNVDVVAGI SYDWRDSVEA KKHEKDGSIT HYDDNNQSAF
NWQVMGKYHF ANEDTLALSY YDRTRFPTLK ERYTTSKPAY NQIAIVNPQL KPERARGVDL
TWNGAFTHDW GFEVSVYYNR VSDAILSHNI DADTIQNQNS GTVDYSGLDA GIKGKISNIL
DVGLSYALIH ADAKRKDIGK ITDLPTQTMT AWMTLKPWEP LSVTLSEEAR SSSYSNSDGS
QKAAGFAVTH IRADYTLGHG FSVNASVNNL FDTKYAYSEG FIEEGRNFWA GIAYTF
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