Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_1942 |
Symbol | dhaL |
ID | 6145954 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010498 |
Strand | + |
Start bp | 1964007 |
End bp | 1964639 |
Gene Length | 633 bp |
Protein Length | 210 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 641616818 |
Product | dihydroxyacetone kinase subunit DhaL |
Protein accession | YP_001743994 |
Protein GI | 170682562 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2376] Dihydroxyacetone kinase |
TIGRFAM ID | [TIGR02365] dihydroxyacetone kinase, phosphoprotein-dependent, L subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 0.0284068 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCACTGA GCAGAACTCA AATTGTTAAC TGGCTCACTC GTTGTGGCGA TATTTTCAGC ACCGAGAGCG AGTATCTTAC CGGACTGGAT CGCGAAATTG GCGACGCTGA CCACGGGCTA AATATGAACC GAGGCTTTAG CAAAGTGGTG GAAAAACTCC CTGCTATCGC AGATAAAGAT ATCGGTTTCA TTCTTAAGAA TACCGGTATG ACGCTACTTT CCAGCGTCGG AGGTGCCAGT GGTCCGCTGT TCGGTACCTT CTTTATCCGC GCCGCACAGG CGACCCAGGC ACGGCAAAGC CTGACGCTGG AAGAGCTTTA TCAGATGTTC CGCGATGGCG CGGACGGCGT AATCAGTCGC GGTAAAGCCG AACCTGGCGA TAAAACCATG TGTGATGTCT GGGTGTCGGT GGTGGAATCG TTACGTCAGT CCTGCGAGCA AAATCTTTCT GTTCCGGCGG CCCTCGACAC TGCCAGTAGC ATCGCCGAAT CCGCTGCACA AAGTACGATT ACGATGCAAG CCCGCAAAGG CCGCGCCAGT TATCTCGGTG AACGCAGTAT TGGTCACCAG GATCCCGGCG CGACCTCGGT GATGTTTATG ATGCAAATGT TGGCGTTAGC CGCAAAAGAG TAA
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Protein sequence | MSLSRTQIVN WLTRCGDIFS TESEYLTGLD REIGDADHGL NMNRGFSKVV EKLPAIADKD IGFILKNTGM TLLSSVGGAS GPLFGTFFIR AAQATQARQS LTLEELYQMF RDGADGVISR GKAEPGDKTM CDVWVSVVES LRQSCEQNLS VPAALDTASS IAESAAQSTI TMQARKGRAS YLGERSIGHQ DPGATSVMFM MQMLALAAKE
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