| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_1941 |
|---|
| Symbol | dhaK |
|---|
| ID | 6146488 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli SMS-3-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010498 |
|---|
| Strand | + |
|---|
| Start bp | 1962926 |
|---|
| End bp | 1963996 |
|---|
| Gene Length | 1071 bp |
|---|
| Protein Length | 356 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 641616817 |
|---|
| Product | dihydroxyacetone kinase subunit DhaK |
|---|
| Protein accession | YP_001743993 |
|---|
| Protein GI | 170681763 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2376] Dihydroxyacetone kinase |
|---|
| TIGRFAM ID | [TIGR02363] dihydroxyacetone kinase, DhaK subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 37 |
|---|
| Fosmid unclonability p-value | 0.0517776 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAAT TGATCAATGA TGTGCAAGAC GTACTGGACG AACAACTGGC AGGACTAGCG
AAAGCGCATC CATCGCTGAC ACTGCACCAG GATCCGGTGT ATGTCACCCG AGCTGATGCC
CCCGTTGCAG GTAAAGTCGC CCTGCTGTCG GGTGGCGGCA GCGGACACGA GCCGATGCAC
TGTGGCTATA TCGGTCAGGG GATGCTTTCG GGAGCCTGTC CGGGCGAAAT TTTCACCTCA
CCGACGCCCG ATAAAATCTT TGAATGCGCC ATGCAAATTG ATGGCGGCGA AGGTGTACTG
TTGATTATCA AAAATTACAC CGGCGATATT CTTAACTTCG AAACAGCAAC CGAGTTACTG
CACGATAGCG GCGTAAAAGT GACCACTGTG GTCATTGATG ACGACGTTGC AGTAAAAGAC
AGTCTTTATA CCGCCGGGCG GCGCGGCGTT GCCAACACCG TATTAATTGA AAAACTCGTA
GGTGCAGCGG CGGAGCGTGG CGACTCACTG GACGCCTGTG CGGAACTGGG GCGTAAGTTG
AATAATCAAG GCCATTCAAT AGGTATCGCT CTCGGTGCCT GTACTGTTCC TGCCGCGGGC
AAACCTTCTT TTACCCTGGC GGATAATGAG ATGGAATTTG GCGTCGGCAT TCATGGTGAG
CCAGGTATTG ACCGCCGCCC CTTCTCTTCC CTTGATCAAA CCGTCGATGA AATGTTCGAC
ACCCTGCTGG AAAATGGCTC ATACCATCGC ACTTTGCGTT TCTGGGATTA TCAACAAGGC
AGCTGGCAGG AAGAACCACA AACCAAACAA CCGCTCCAGT CTGGCGATCG GGTGATTGCG
CTGGTTAACA ATCTTGGCGC AACTCCGCTT TCTGAGCTGT ACGGCGTCTA TAACCGCCTG
ACCACACGTT GCCAGCAAGC GGGATTGACT ATCGAACGTA ATTTAATTGG CGCGTACTGC
ACCTCACTGG ATATGACCGG TTTCTCAATC ACCTTACTGA AAGTTGATGA CGAAACGCTG
GCACTCTGGG ACGCCCCGGT CCACACCCCG GCCCTTAACT GGGGTAAATA A
|
|---|
| Protein sequence | MKKLINDVQD VLDEQLAGLA KAHPSLTLHQ DPVYVTRADA PVAGKVALLS GGGSGHEPMH
CGYIGQGMLS GACPGEIFTS PTPDKIFECA MQIDGGEGVL LIIKNYTGDI LNFETATELL
HDSGVKVTTV VIDDDVAVKD SLYTAGRRGV ANTVLIEKLV GAAAERGDSL DACAELGRKL
NNQGHSIGIA LGACTVPAAG KPSFTLADNE MEFGVGIHGE PGIDRRPFSS LDQTVDEMFD
TLLENGSYHR TLRFWDYQQG SWQEEPQTKQ PLQSGDRVIA LVNNLGATPL SELYGVYNRL
TTRCQQAGLT IERNLIGAYC TSLDMTGFSI TLLKVDDETL ALWDAPVHTP ALNWGK
|
|---|
| |