| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_1938 |
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| Symbol | pth |
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| ID | 6143166 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | + |
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| Start bp | 1958582 |
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| End bp | 1959166 |
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| Gene Length | 585 bp |
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| Protein Length | 194 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 641616814 |
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| Product | peptidyl-tRNA hydrolase |
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| Protein accession | YP_001743990 |
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| Protein GI | 170681473 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0193] Peptidyl-tRNA hydrolase |
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| TIGRFAM ID | [TIGR00447] peptidyl-tRNA hydrolase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.11289 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 0.097849 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGACGATTA AATTGATTGT CGGCCTGGCG AACCCCGGCG CTGAATACGC CGCAACGCGA
CATAATGCTG GTGCCTGGTT CGTTGACTTA CTGGCAGAGC GATTGCGCGC TCCGCTGCGC
GAAGAGGCTA AATTCTTTGG TTATACTTCG CGAGTCACCC TTGGAGGCGA AGATGTCCGC
CTGTTAGTCC CGACTACATT TATGAATCTC AGCGGCAAAG CCGTTGCGGC GATGGCCAGT
TTTTTCCGTA TTAATCCGGA CGAAATTCTG GTGGCCCACG ACGAACTGGA TCTGCCTCCT
GGCGTCGCCA AATTTAAGTT GGGCGGTGGC CATGGTGGTC ACAATGGACT GAAAGACATC
ATCAGTAAAT TGGGTAATAA CCCTAACTTT CACCGTTTAC GCATCGGAAT TGGTCATCCA
GGCGATAAAA ATAAAGTTGT CGGTTTTGTG TTAGGCAAAC CGCCTGTTAG TGAACAGAAG
TTAATTGATG AAGCCATCGA CGAAGCGGCA CGTTGTACTG AAATGTGGTT TACAGATGGC
TTGACCAAAG CAACGAACCG ATTGCACGCC TTTAAAGCGC AATAA
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| Protein sequence | MTIKLIVGLA NPGAEYAATR HNAGAWFVDL LAERLRAPLR EEAKFFGYTS RVTLGGEDVR
LLVPTTFMNL SGKAVAAMAS FFRINPDEIL VAHDELDLPP GVAKFKLGGG HGGHNGLKDI
ISKLGNNPNF HRLRIGIGHP GDKNKVVGFV LGKPPVSEQK LIDEAIDEAA RCTEMWFTDG
LTKATNRLHA FKAQ
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