Gene EcSMS35_1935 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_1935 
Symbolprs 
ID6145235 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp1955154 
End bp1956167 
Gene Length1014 bp 
Protein Length337 aa 
Translation table11 
GC content53% 
IMG OID641616811 
Productribose-phosphate pyrophosphokinase 
Protein accessionYP_001743987 
Protein GI170680628 
COG category[E] Amino acid transport and metabolism
[F] Nucleotide transport and metabolism 
COG ID[COG0462] Phosphoribosylpyrophosphate synthetase 
TIGRFAM ID[TIGR01251] ribose-phosphate pyrophosphokinase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000351672 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value0.350342 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTGGCC CGCACAGTTT TCGGCAGATT CTTTCCACCA ATGGACGCAT GCCTGAGGTT 
CTTCTCGTGC CTGATATGAA GCTTTTTGCT GGTAACGCCA CCCCGGAACT AGCACAACGT
ATTGCCAACC GCCTGTACAC TTCACTCGGC GACGCCGCTG TAGGTCGCTT TAGCGACGGC
GAAGTCAGCG TACAAATTAA TGAAAATGTA CGCGGTGGTG ATATTTTCAT CATCCAGTCC
ACTTGTGCCC CTACTAACGA CAACCTGATG GAATTAGTCG TTATGGTTGA TGCCCTGCGT
CGTGCTTCCG CAGGTCGTAT CACCGCTGTT ATCCCCTACT TTGGCTATGC GCGCCAGGAC
CGTCGCGTCC GTTCCGCTCG TGTACCAATC ACTGCGAAAG TGGTTGCAGA CTTCCTCTCC
AGCGTCGGTG TTGACCGTGT GCTGACAGTG GATCTGCACG CTGAACAGAT TCAGGGTTTC
TTCGACGTTC CGGTTGATAA CGTATTTGGT AGCCCGATCC TGCTGGAAGA CATGCTGCAG
CTGAATCTGG ATAACCCTAT TGTGGTTTCT CCGGACATCG GCGGCGTTGT GCGTGCCCGC
GCTATCGCTA AGCTGCTGAA CGATACCGAT ATGGCAATCA TCGACAAACG TCGTCCGCGT
GCGAACGTTT CCCAGGTGAT GCATATCATC GGTGACGTTG CAGGTCGTGA CTGCGTACTG
GTCGATGATA TGATCGACAC TGGCGGTACG CTGTGTAAAG CTGCTGAAGC TCTGAAAGAA
CGTGGTGCTA AACGTGTATT TGCGTACGCG ACTCACCCGA TCTTCTCTGG CAACGCGGCG
AACAACCTGC GTAACTCTGT AATTGATGAA GTCGTTGTCT GCGATACCAT TCCGCTGAGC
GATGAAATCA AATCACTGCC GAACGTGCGT ACTCTGACCC TGTCAGGTAT GCTGGCCGAA
GCGATTCGTC GTATCAGCAA CGAAGAATCG ATCTCTGCCA TGTTCGAACA CTAA
 
Protein sequence
MPGPHSFRQI LSTNGRMPEV LLVPDMKLFA GNATPELAQR IANRLYTSLG DAAVGRFSDG 
EVSVQINENV RGGDIFIIQS TCAPTNDNLM ELVVMVDALR RASAGRITAV IPYFGYARQD
RRVRSARVPI TAKVVADFLS SVGVDRVLTV DLHAEQIQGF FDVPVDNVFG SPILLEDMLQ
LNLDNPIVVS PDIGGVVRAR AIAKLLNDTD MAIIDKRRPR ANVSQVMHII GDVAGRDCVL
VDDMIDTGGT LCKAAEALKE RGAKRVFAYA THPIFSGNAA NNLRNSVIDE VVVCDTIPLS
DEIKSLPNVR TLTLSGMLAE AIRRISNEES ISAMFEH