| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_1931 |
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| Symbol | prfA |
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| ID | 6147402 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | - |
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| Start bp | 1951001 |
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| End bp | 1952083 |
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| Gene Length | 1083 bp |
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| Protein Length | 360 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 641616807 |
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| Product | peptide chain release factor 1 |
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| Protein accession | YP_001743983 |
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| Protein GI | 170682630 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0216] Protein chain release factor A |
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| TIGRFAM ID | [TIGR00019] peptide chain release factor 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.000000608431 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 0.0690317 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCCTT CTATCGTTGC CAAACTGGAA GCCCTGCATG AACGCCATGA AGAAGTTCAG
GCGTTGCTGG GTGACGCGCA AACTATCGCC GACCAGGAAC GTTTTCGCGC ATTATCACGC
GAATATGCGC AGTTAAGTGA TGTTTCGCGC TGTTTTACCG ACTGGCAACA GGTTCAGGAA
GATATCGAAA CCGCACAGAT GATGCTCGAC GATCCTGAAA TGCGTGAGAT GGCGCAGGAT
GAACTGCGCG AAGCTAAAGA AAAAAGCGAG CAACTGGAAC AGCAATTACA GGTTCTGTTA
CTACCAAAAG ATCCTGATGA CGAACGTAAC GCCTTCCTCG AAGTCCGTGC CGGAACCGGC
GGCGACGAAG CGGCGCTGTT CGCTGGCGAT CTGTTCCGTA TGTACAGCCG TTACGCCGAA
GCCCGCCGCT GGCGTGTAGA AATCATGAGC GCCAGCGAGG GTGAACATGG TGGTTATAAA
GAGATCATCG CCAAAATTAG CGGTGATGGT GTATATGGTC GTTTGAAATT CGAATCTGGC
GGTCATCGCG TGCAGCGTGT TCCTGCTACG GAATCGCAGG GTCGTATTCA TACTTCTGCT
TGTACCGTTG CGGTAATGCC AGAACTGCCT GACGCAGAAC TGCCGGACAT CAACCCAGCA
GATTTGCGCA TTGATACTTT CCGCTCGTCA GGGGCGGGGG GGCAGCACGT TAACACCACC
GATTCGGCAA TTCGTATTAC TCACTTGCCG ACCGGAATTG TTGTTGAATG TCAGGACGAA
CGTTCACAAC ATAAAAACAA AGCTAAAGCA CTTTCTGTAC TCGGTGCTCG TATCCACGCT
GCTGAAATGG CAAAACGGCA ACAGGCCGAA GCGTCTACCC GTCGTAACCT GCTGGGGAGT
GGCGATCGCA GCGACCGTAA CCGTACTTAC AACTTCCCGC AGGGGCGCGT TACCGATCAC
CGCATCAACC TGACGCTCTA CCGCCTGGAT GAAGTGATGG AAGGTAAGCT GGATATGCTA
ATTGAACCGA TTATCCAGGA ACATCAGGCC GACCAACTGG CGGCGTTGTC CGAGCAGGAA
TAA
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| Protein sequence | MKPSIVAKLE ALHERHEEVQ ALLGDAQTIA DQERFRALSR EYAQLSDVSR CFTDWQQVQE
DIETAQMMLD DPEMREMAQD ELREAKEKSE QLEQQLQVLL LPKDPDDERN AFLEVRAGTG
GDEAALFAGD LFRMYSRYAE ARRWRVEIMS ASEGEHGGYK EIIAKISGDG VYGRLKFESG
GHRVQRVPAT ESQGRIHTSA CTVAVMPELP DAELPDINPA DLRIDTFRSS GAGGQHVNTT
DSAIRITHLP TGIVVECQDE RSQHKNKAKA LSVLGARIHA AEMAKRQQAE ASTRRNLLGS
GDRSDRNRTY NFPQGRVTDH RINLTLYRLD EVMEGKLDML IEPIIQEHQA DQLAALSEQE
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