Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_1906 |
Symbol | |
ID | 6145668 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010498 |
Strand | - |
Start bp | 1927026 |
End bp | 1928039 |
Gene Length | 1014 bp |
Protein Length | 337 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 641616782 |
Product | response regulator of RpoS |
Protein accession | YP_001743960 |
Protein GI | 170681852 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.174648 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 41 |
Fosmid unclonability p-value | 0.215745 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGCAGC CATTGGTCGG AAAACAGATT CTCATTGTTG AAGATGAGCA GGTATTTCGC TCGCTTCTGG ATTCGTGGTT TTCCTCATTG GGAGCGACAA CGGTACTGGC GGCTGATGGG GTGGATGCCC TTGAGTTGCT GGGAGGTTTC ACTCCAGACC TGATGATATG TGATATCGCG ATGCCCAGAA TGAACGGGCT TAAACTGCTG GAACATATAC GCAACAGAGG TGACCAGACA CCGGTTCTGG TGATATCTGC CACTGAAAAT ATGGCAGATA TTGCCAAAGC GTTACGTCTG GGCGTTGAAG ATGTTTTGCT GAAACCAGTT AAAGATCTGA ATCGCTTGCG CGAGATGGTT TTTGCCTGTC TCTATCCCAG CATGTTTAAT TCCCGCGTTG AGGAAGAGGA AAGGCTTTTT CGCGACTGGG ATGCAATGGT TGATAACCCT GCCGCAGCGG CGAAATTATT ACAGGAATTG CAACCGCCGG TTCAGCAGGT GATTTCCCAT TGCCGGGTTA ATTATCGTCA ATTGGTTGCC GCGGACAAAC CCGGCCTGGT GCTTGATATT GCCGCACTTT CGGAAAACGA TCTGGCATTT TATTGCCTTG ATGTCACCCG AGCTGGACAT AATGGCGTAC TTGCTGCCTT GTTATTACGC GCATTGTTTA ACGGATTATT ACAGGAACAG CTTGCACACC AAAATCAACG GTTGCCAGAG TTGGGCGCGT TATTGAAGCA GGTAAACCAT TTACTCCGTC AGGCCAATCT GCCGGGGCAG TTTCCGCTAT TAGTTGGCTA TTATCATCGC GAACTGAAAA ATCTCATTCT GGTTTCTGCG GGTCTGAATG CGACGTTAAA TACCGGCGAA CACCAGGTAC AAATCAGTAA TGGTGTTCCG TTAGGCACTT TAGGTAACGC TTATTTGAAT CAATTGAGCC AGCGATGCGA TGCCTGGCAA TGCCAAATAT GGGGAACCGG TGGTCGGCTG CGCTTGATGT TGTCTGCAGA ATGA
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Protein sequence | MTQPLVGKQI LIVEDEQVFR SLLDSWFSSL GATTVLAADG VDALELLGGF TPDLMICDIA MPRMNGLKLL EHIRNRGDQT PVLVISATEN MADIAKALRL GVEDVLLKPV KDLNRLREMV FACLYPSMFN SRVEEEERLF RDWDAMVDNP AAAAKLLQEL QPPVQQVISH CRVNYRQLVA ADKPGLVLDI AALSENDLAF YCLDVTRAGH NGVLAALLLR ALFNGLLQEQ LAHQNQRLPE LGALLKQVNH LLRQANLPGQ FPLLVGYYHR ELKNLILVSA GLNATLNTGE HQVQISNGVP LGTLGNAYLN QLSQRCDAWQ CQIWGTGGRL RLMLSAE
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