Gene EcSMS35_1905 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_1905 
SymbolgalU 
ID6145308 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp1925916 
End bp1926824 
Gene Length909 bp 
Protein Length302 aa 
Translation table11 
GC content47% 
IMG OID641616781 
ProductUTP--glucose-1-phosphate uridylyltransferase subunit GalU 
Protein accessionYP_001743959 
Protein GI170681483 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1210] UDP-glucose pyrophosphorylase 
TIGRFAM ID[TIGR01099] UTP-glucose-1-phosphate uridylyltransferase 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0432202 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value0.235357 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGCCA TTAATACGAA AGTCAAAAAA GCCGTTATCC CCGTTGCGGG ATTAGGAACC 
AGGATGTTGC CGGCGACGAA AGCCATCCCG AAAGAGATGC TGCCACTTGT CGATAAGCCA
TTAATTCAAT ACGTCGTGAA TGAATGTATT GCGGCTGGCA TTACTGAAAT TGTGCTGGTT
ACTCACTCAT CTAAAAACTC TATTGAAAAC CACTTTGATA CCAGTTTTGA ACTGGAAGCA
ATGCTGGAAA AACGTGTAAA ACGTCAACTG CTTGATGAAG TGCAGTCTAT TTGTCCGCCG
CACGTGACTA TTATGCAAGT TCGTCAGGGG CTGGCGAAAG GCCTGGGACA CGCGGTATTG
TGTGCTCACC CGGTAGTGGG TGATGAACCT GTGGCTGTTA TTTTGCCTGA CGTTATTCTG
GATGAATATG AATCCGATTT GTCACAGGAT AACCTGGCAG AGATGATCCG CCGCTTTGAT
GAAACGGGTC ATAGCCAGAT CATGGTTGAA CCGGTTGCTG ATGTGACCGC ATATGGCGTT
GTGGATTGCA AAGGCGTTGA ATTAGCGCCG GGTGAAAGCG TACCGATGGT TGGCGTGGTT
GAAAAACCAA AAGCGGATGT TGCGCCGTCT AATCTCGCTA TTGTGGGTCG TTACGTTCTT
AGCGCGGATA TTTGGCCGTT GCTGGCAAAA ACCCCTCCGG GTGCTGGTGA TGAAATTCAG
CTCACCGACG CAATTGATAT GCTGATCGAA AAAGAAACGG TGGAAGCCTA TCATATGAAA
GGGAAGAGCC ATGACTGCGG TAATAAATTA GGTTACATGC AGGCCTTCGT TGAATACGGT
ATTCGTCATA ACACCCTTGG CTCGGAATTT AAAGCCTGGC TTGAAGAAGA GATGGGCATT
AAGAAGTAA
 
Protein sequence
MAAINTKVKK AVIPVAGLGT RMLPATKAIP KEMLPLVDKP LIQYVVNECI AAGITEIVLV 
THSSKNSIEN HFDTSFELEA MLEKRVKRQL LDEVQSICPP HVTIMQVRQG LAKGLGHAVL
CAHPVVGDEP VAVILPDVIL DEYESDLSQD NLAEMIRRFD ETGHSQIMVE PVADVTAYGV
VDCKGVELAP GESVPMVGVV EKPKADVAPS NLAIVGRYVL SADIWPLLAK TPPGAGDEIQ
LTDAIDMLIE KETVEAYHMK GKSHDCGNKL GYMQAFVEYG IRHNTLGSEF KAWLEEEMGI
KK