| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_1904 |
|---|
| Symbol | |
|---|
| ID | 6144477 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli SMS-3-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010498 |
|---|
| Strand | + |
|---|
| Start bp | 1925358 |
|---|
| End bp | 1925771 |
|---|
| Gene Length | 414 bp |
|---|
| Protein Length | 137 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 641616780 |
|---|
| Product | global DNA-binding transcriptional dual regulator H-NS |
|---|
| Protein accession | YP_001743958 |
|---|
| Protein GI | 170681125 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2916] DNA-binding protein H-NS |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.300661 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 41 |
|---|
| Fosmid unclonability p-value | 0.199286 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGAAG CACTTAAAAT TCTGAACAAC ATCCGTACTC TTCGTGCGCA GGCAAGAGAA
TGTACACTTG AAACGCTGGA AGAAATGCTG GAAAAATTAG AAGTTGTTGT TAACGAACGT
CGCGAAGAAG AAAGCGCGGC TGCTGCTGAA GTTGAAGAGC GCACTCGTAA ACTGCAGCAA
TATCGCGAAA TGCTGATCGC TGACGGTATT GACCCGAACG AACTGCTGAA TAGCCTTGCT
GCCGTTAAAT CTGGCACCAA AGCTAAACGT GCTCAGCGTC CGGCAAAATA TAGCTACGTT
GACGAAAACG GCGAAACTAA AACCTGGACT GGCCAGGGCC GTACTCCAGC TGTAATCAAA
AAAGCAATGG ATGAGCAAGG TAAATCCCTC GACGATTTCC TGATCAAGCA ATAA
|
|---|
| Protein sequence | MSEALKILNN IRTLRAQARE CTLETLEEML EKLEVVVNER REEESAAAAE VEERTRKLQQ
YREMLIADGI DPNELLNSLA AVKSGTKAKR AQRPAKYSYV DENGETKTWT GQGRTPAVIK
KAMDEQGKSL DDFLIKQ
|
|---|
| |