| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_1902 |
|---|
| Symbol | tdk |
|---|
| ID | 6143242 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli SMS-3-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010498 |
|---|
| Strand | - |
|---|
| Start bp | 1924137 |
|---|
| End bp | 1924754 |
|---|
| Gene Length | 618 bp |
|---|
| Protein Length | 205 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 641616778 |
|---|
| Product | thymidine kinase |
|---|
| Protein accession | YP_001743956 |
|---|
| Protein GI | 170680630 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG1435] Thymidine kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.354275 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 41 |
|---|
| Fosmid unclonability p-value | 0.231836 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCACAGC TATATTTCTA CTATTCCGCA ATGAATGCGG GTAAGTCTAC AGCATTGTTG
CAATCTTCAT ACAATTACCA GGAGCGCGGC ATGCGCACTG TCGTATATAC GGCAGAAATT
GATGATCGCT TTGGTGCCGG GAAAGTCAGC TCGCGTATAG GTTTGTCATC GCCTGCAAAA
TTATTTAACC AAAATTCATC ATTATTTGAT GAGATTCGTG CGGAACATGA ACAGCAGGCA
ATTCATTGCG TACTGGTTGA TGAATGCCAG TTTTTAACCA GACAACAAGT ATATGAATTA
TCGGAGGTTG TCGATCAACT CGATATACCC GTACTTTGTT ATGGTTTACG TACCGATTTT
CGAGGTGAGT TATTTATTGG CAGCCAATAC TTACTGGCAT GGTCCGACAA ACTGGTTGAA
TTAAAAACCA TCTGTTTTTG TGGCCGCAAA GCAAGCATGG TGCTGCGTCT TGATCAAGCA
GGCAGACCTT ATAACGAAGG TGAGCAGGTG GTTATTGGTG GTAATGAACG CTACGTTTCT
GTATGCCGTA AACACTATAA AGAAGCGTTA GAAGTCGGCT CATTAACGGC TATTCAGGAA
AGGCATCGCC ACGATTAA
|
|---|
| Protein sequence | MAQLYFYYSA MNAGKSTALL QSSYNYQERG MRTVVYTAEI DDRFGAGKVS SRIGLSSPAK
LFNQNSSLFD EIRAEHEQQA IHCVLVDECQ FLTRQQVYEL SEVVDQLDIP VLCYGLRTDF
RGELFIGSQY LLAWSDKLVE LKTICFCGRK ASMVLRLDQA GRPYNEGEQV VIGGNERYVS
VCRKHYKEAL EVGSLTAIQE RHRHD
|
|---|
| |