| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_1896 |
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| Symbol | oppB |
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| ID | 6142758 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | - |
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| Start bp | 1916660 |
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| End bp | 1917580 |
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| Gene Length | 921 bp |
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| Protein Length | 306 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641616772 |
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| Product | oligopeptide transporter permease |
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| Protein accession | YP_001743950 |
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| Protein GI | 170681715 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.22801 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 0.152903 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTTAAAAT TTATTCTACG TCGCTGTCTG GAAGCGATTC CGACGCTATT TATTCTTATT
ACTATTTCGT TCTTTATGAT GCGCCTCGCA CCGGGCAGTC CTTTTACCGG CGAACGTACT
TTACCACCGG AAGTGATGGC CAATATCGAA GCGAAATATC ATCTTAATGA TCCGATCATG
ACACAGTATT TCAGCTACCT GAAACAACTG GCGCATGGCG ATTTCGGTCC ATCGTTTAAA
TATAAAGATT ATTCGGTCAA CGACCTGGTT GCATCCAGTT TTCCCGTTTC TGCCAAACTG
GGAGCCGCAG CATTTTTCCT TGCGGTAATA CTGGGTGTTA GTGCTGGCGT TATTGCCGCA
TTAAAACAAA ACACCAAATG GGACTATACC GTGATGGGGC TGGCAATGAC CGGGGTTGTT
ATCCCCAGTT TTGTGGTTGC GCCATTATTA GTCATGATAT TTGCGATCAT TTTGCATTGG
CTGCCGGGCG GTGGCTGGAA TGGTGGTGCG CTTAAATTCA TGATACTGCC AATGGTGGCG
TTGTCACTCG CCTATATCGC CAGTATTGCG CGTATTACCC GTGGCTCTAT GATTGAAGTA
TTACACTCCA ACTTTATTCG TACTGCCCGG GCGAAAGGGT TACCTATGCG GCGGATCATT
TTACGCCACG CATTAAAACC TGCTCTGTTA CCCGTGCTCT CCTATATGGG CCCTGCATTT
GTCGGCATTA TTACCGGTTC TATGGTCATC GAAACCATTT ATGGTTTGCC GGGGATTGGG
CAATTGTTCG TTAATGGTGC ATTGAACCGT GACTATTCCT TAGTGTTAAG CCTGACCATC
CTGGTTGGTG CTTTAACCAT TTTGTTTAAT GCCATTGTCG ATGTGCTATA TGCGGTTATC
GACCCGAAAA TCCGTTACTG A
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| Protein sequence | MLKFILRRCL EAIPTLFILI TISFFMMRLA PGSPFTGERT LPPEVMANIE AKYHLNDPIM
TQYFSYLKQL AHGDFGPSFK YKDYSVNDLV ASSFPVSAKL GAAAFFLAVI LGVSAGVIAA
LKQNTKWDYT VMGLAMTGVV IPSFVVAPLL VMIFAIILHW LPGGGWNGGA LKFMILPMVA
LSLAYIASIA RITRGSMIEV LHSNFIRTAR AKGLPMRRII LRHALKPALL PVLSYMGPAF
VGIITGSMVI ETIYGLPGIG QLFVNGALNR DYSLVLSLTI LVGALTILFN AIVDVLYAVI
DPKIRY
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