| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_1895 |
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| Symbol | oppC |
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| ID | 6143595 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | - |
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| Start bp | 1915737 |
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| End bp | 1916642 |
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| Gene Length | 906 bp |
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| Protein Length | 301 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 641616771 |
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| Product | oligopeptide ABC transporter, permease protein OppC |
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| Protein accession | YP_001743949 |
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| Protein GI | 170683469 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.213821 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 0.110744 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTTAAGTA AGAAAAACAG CGAGACGCTG GAAAATTTCA GTGAAAAGCT GGAGGTCGAA
GGGCGCAGCT TGTGGCAGGA CGCACGTCGA CGTTTTATGC ATAACCGTGC GGCGGTTGCC
AGTCTGATAG TGCTGGTGCT GATCGCGTTA TTTGTCATCC TGGCACCGAT GCTTTCGCAG
TTTGCCTATG ACGATACTGA CTGGGCGATG ATGTCCAGCG CCCCGGATAT GGAGTCCGGT
CACTACTTTG GTACTGACTC ATCTGGTCGC GACCTGCTTG TGCGCGTTGC GATTGGCGGG
CGTATCTCAC TCATGGTCGG TGTTGCTGCG GCACTGGTGG CAGTGGTCGT GGGGACACTT
TATGGTTCGC TTTCCGGTTA TCTGGGCGGT AAAGTGGATT CGGTAATGAT GCGTCTGCTG
GAAATCCTCA ACTCCTTCCC ATTCATGTTC TTCGTCATTT TGCTGGTGAC CTTTTTCGGT
CAAAACATCC TGCTGATTTT CGTGGCGATT GGCATGGTTT CCTGGCTGGA TATGGCTCGT
ATTGTGCGTG GGCAAACCCT GAGTCTGAAG CGCAAAGAGT TTATTGAGGC GGCACAAGTT
GGCGGTGTAT CGACGCCGGG CATTGTTATT CGCCACATTG TGCCGAACGT ACTCGGTGTG
GTGGTGGTCT ACGCATCGCT ATTGGTGCCC AGCATGATCC TCTTTGAATC TTTCCTTAGC
TTCCTGGGGT TGGGGACGCA AGAGCCGTTA AGCAGCTGGG GCGCATTGCT GAGTGATGGC
GCGAACTCGA TGGAAGTCTC TCCATGGTTA CTGTTGTTCC CAGCGGGATT CCTCGTGGTG
ACGCTATTTT GTTTCAACTT TATCGGCGAT GGCTTGCGTG ATGCCCTCGA CCCGAAAGAT
CGTTAA
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| Protein sequence | MLSKKNSETL ENFSEKLEVE GRSLWQDARR RFMHNRAAVA SLIVLVLIAL FVILAPMLSQ
FAYDDTDWAM MSSAPDMESG HYFGTDSSGR DLLVRVAIGG RISLMVGVAA ALVAVVVGTL
YGSLSGYLGG KVDSVMMRLL EILNSFPFMF FVILLVTFFG QNILLIFVAI GMVSWLDMAR
IVRGQTLSLK RKEFIEAAQV GGVSTPGIVI RHIVPNVLGV VVVYASLLVP SMILFESFLS
FLGLGTQEPL SSWGALLSDG ANSMEVSPWL LLFPAGFLVV TLFCFNFIGD GLRDALDPKD
R
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