Gene EcSMS35_1892 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_1892 
Symbol 
ID6142664 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp1913329 
End bp1913658 
Gene Length330 bp 
Protein Length109 aa 
Translation table11 
GC content48% 
IMG OID641616768 
ProductdsDNA-mimic protein 
Protein accessionYP_001743946 
Protein GI170683928 
COG category[S] Function unknown 
COG ID[COG3099] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.739591 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value0.0252287 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATATGG ATCTAAACAA TCGCCTGACT GAAGATGAAA CGCTTGAGCA GGCCTACGAT 
ATTTTTCTCG AACTGGCTGC CGACAATCTC GATCCAGCTG ATGTTCTGCT GTTCAATCTT
CAGTTTGAAG AGCGCGGCGG CGCGGAGTTA TTCGATCCGG CGGAAGACTG GCAGGAACAT
GTTGATTTCG ATTTGAACCC GGACTTTTTT GCCGAAGTGG TGATTGGTCT GGCGGACAGT
GAAGATGGTG AAATCAACGA TGTTTTCGCC CGCATTCTGT TATGCCGCGA AAAAGATCAC
AAACTTTGCC ATATCATCTG GCGGGAATAA
 
Protein sequence
MDMDLNNRLT EDETLEQAYD IFLELAADNL DPADVLLFNL QFEERGGAEL FDPAEDWQEH 
VDFDLNPDFF AEVVIGLADS EDGEINDVFA RILLCREKDH KLCHIIWRE