Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_1889 |
Symbol | |
ID | 6145119 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010498 |
Strand | + |
Start bp | 1909030 |
End bp | 1909569 |
Gene Length | 540 bp |
Protein Length | 179 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 641616765 |
Product | IS911 transposase orfB |
Protein accession | YP_001743943 |
Protein GI | 170682061 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2801] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 0.00394293 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGATAACAG GTGTCTGGAA ATATAGGGGC AAATCCATAT GGTGCGGAGA TATTACGTAT ATCTGGGCAG GAAATCGCTG GTGCTATCTG GCGGTCGTCA TGGATCTTTT TGCCCGCAGG GTTATCGGCT GGAGCCTGTC AGCGAATGCC GATACTGCAC TGATAAGCAG TGCCTTGCGG ATGGCGTATG AGGTGCGTGG TCAGCCGCGG GACGTCATGT TCCATAGCGA CCAGGGAAGT CAGTATACAG GACTGAAATA TCAACAGCTT CTCTGGCGTT ACAGGATAAA GCAAAGTGTC AGCCGACGGG GAAACTGCTG GGATAACAGT CCTATGGAAC GCTTCTTCCG CAGTCTGAAA ACAGAATGGG TGCCGACGGA TGGTTACGTA GGCAAGGACG AGGCCCGGCA ACAAATTAGC GGTTATATCC TGAATTATTA CAATAGCGTC AGGCCTCACC ATTACAACGG TGGGTTGACG CCGGAAGAAT CAGAGAACAG ATACCGTTTT TACTGTAAAA CCGTGGCCAA TATTACTTGA
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Protein sequence | MITGVWKYRG KSIWCGDITY IWAGNRWCYL AVVMDLFARR VIGWSLSANA DTALISSALR MAYEVRGQPR DVMFHSDQGS QYTGLKYQQL LWRYRIKQSV SRRGNCWDNS PMERFFRSLK TEWVPTDGYV GKDEARQQIS GYILNYYNSV RPHHYNGGLT PEESENRYRF YCKTVANIT
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