Gene EcSMS35_1889 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_1889 
Symbol 
ID6145119 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp1909030 
End bp1909569 
Gene Length540 bp 
Protein Length179 aa 
Translation table11 
GC content50% 
IMG OID641616765 
ProductIS911 transposase orfB 
Protein accessionYP_001743943 
Protein GI170682061 
COG category[L] Replication, recombination and repair 
COG ID[COG2801] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.00394293 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGATAACAG GTGTCTGGAA ATATAGGGGC AAATCCATAT GGTGCGGAGA TATTACGTAT 
ATCTGGGCAG GAAATCGCTG GTGCTATCTG GCGGTCGTCA TGGATCTTTT TGCCCGCAGG
GTTATCGGCT GGAGCCTGTC AGCGAATGCC GATACTGCAC TGATAAGCAG TGCCTTGCGG
ATGGCGTATG AGGTGCGTGG TCAGCCGCGG GACGTCATGT TCCATAGCGA CCAGGGAAGT
CAGTATACAG GACTGAAATA TCAACAGCTT CTCTGGCGTT ACAGGATAAA GCAAAGTGTC
AGCCGACGGG GAAACTGCTG GGATAACAGT CCTATGGAAC GCTTCTTCCG CAGTCTGAAA
ACAGAATGGG TGCCGACGGA TGGTTACGTA GGCAAGGACG AGGCCCGGCA ACAAATTAGC
GGTTATATCC TGAATTATTA CAATAGCGTC AGGCCTCACC ATTACAACGG TGGGTTGACG
CCGGAAGAAT CAGAGAACAG ATACCGTTTT TACTGTAAAA CCGTGGCCAA TATTACTTGA
 
Protein sequence
MITGVWKYRG KSIWCGDITY IWAGNRWCYL AVVMDLFARR VIGWSLSANA DTALISSALR 
MAYEVRGQPR DVMFHSDQGS QYTGLKYQQL LWRYRIKQSV SRRGNCWDNS PMERFFRSLK
TEWVPTDGYV GKDEARQQIS GYILNYYNSV RPHHYNGGLT PEESENRYRF YCKTVANIT