| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_1888 |
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| Symbol | |
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| ID | 6145253 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | + |
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| Start bp | 1908150 |
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| End bp | 1909055 |
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| Gene Length | 906 bp |
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| Protein Length | 301 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 641616764 |
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| Product | IS2 transposase orfB |
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| Protein accession | YP_001743942 |
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| Protein GI | 170680938 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG2801] Transposase and inactivated derivatives |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.00494374 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGGATAGCG CACGCGCCCT TATTGCCCGG GGATGGGGAG TAAGCTTAGT CAGCCGTTGT
CTCCGGGTGT CGCGTGCGCA GTTGCACGTA ATTCTCAGAC GAACCGATGA CTGGAAAGAT
GGTCGCCGCA GCCGTCACTC AGATGATACG GATGTGCTTC TCCGTATACA CCATGTTATC
GGAGAGCTGC CCACGTATGG TTATCGTCGG GTATGGGCGC TGCTTCGCAG ACAGGCCGAA
CTTGATGGTA TGCCTGCGAT CAATGCCAAA CGTGTTTACC GGATCATGCG CCAGAATGCG
CTGTTGCTTG AGCGAAAAAC CGCTGTACCG CCATCGAAAC GGGCACATAC TGGCAAAGTG
GCCGTGAAAG AAAGCAATCA ACGATGGTGC TCTGACGGGT TCGAGTTCCG CTGTGATAAC
GGAGAAAAAC TGCGAGTCAC GTTCGCGCTG GACTGCTGTG ACCGTGAGGC ACTGCACTGG
GCAGTCACTA CGGGCGGCTT CGACAGTGAA ACAGTACAGG ACGTCATGCT GGGAGCGGTG
GAACGCCGCT TCGGCAACGA GCTTCCGGCG TCTCCAGTAG AGTGGCTGAC GGATAATGGT
TCATGCTACC GGGCTAATGA AACACGGCAG TTTGCCCGGA TGTTGGGGCT TGAACCGAAG
AACACGGCGG TGCGGAGTCC GGAGAGTAAC GGCATAGCAG AGAGCTTCGT GAAAACGATA
AAGCGTGACT ACATCAGTAT CATGCCTAAA CCAGACGGGT TAACGGCAGC AAAGAACCTT
GCAGAGGCGT TCGAGCATTA TAACGAATGG CATCCGCATA GTGCACTGGG TTATCGCTCG
CCACGGGAAT ATCTGCGGCA GCAGGCCAGT AATGGGTTAA GTGATAACAG GTGTCTGGAA
ATATAG
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| Protein sequence | MDSARALIAR GWGVSLVSRC LRVSRAQLHV ILRRTDDWKD GRRSRHSDDT DVLLRIHHVI
GELPTYGYRR VWALLRRQAE LDGMPAINAK RVYRIMRQNA LLLERKTAVP PSKRAHTGKV
AVKESNQRWC SDGFEFRCDN GEKLRVTFAL DCCDREALHW AVTTGGFDSE TVQDVMLGAV
ERRFGNELPA SPVEWLTDNG SCYRANETRQ FARMLGLEPK NTAVRSPESN GIAESFVKTI
KRDYISIMPK PDGLTAAKNL AEAFEHYNEW HPHSALGYRS PREYLRQQAS NGLSDNRCLE
I
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