Gene EcSMS35_1887 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_1887 
Symbol 
ID6144912 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp1907782 
End bp1908192 
Gene Length411 bp 
Protein Length136 aa 
Translation table11 
GC content51% 
IMG OID641616763 
Productinsertion sequence 2 OrfA protein 
Protein accessionYP_001743941 
Protein GI170681071 
COG category[L] Replication, recombination and repair 
COG ID[COG2963] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.00245938 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGATAGTCT TAATACTAGT TTTTAGACTA GTCATTGGAG AGCAGATGAT TGATGTCTTA 
GGACCGGAGA AACGCAGACG GCGTACTACA CAGGAAAAGA TCGCTATTGT TCAGCAGAGT
TTTGAACCGG GAATGACGGT CTCCCTTGTT GCCCGGCAAC ACGGTGTGGC AGCCAGCCAG
TTATTTCTCT GGCGCAAGCA ATACCAGGAG GGAAGTCTTA CTGCTGTGGC CGCAGGAGAG
CAGGTCGTTC CTGCCTCTGA ACTTGCTGCT GCCATGAAGC AGATTAAAGA ACTCCAGCGC
CTGCTCGGCA AAAAAACGAT GGAAAATGAA CTCCTTAAAG AAGCCGTTGA ATACGGGCGT
GCAAAAAAGT GGATAGCGCA CGCGCCCTTA TTGCCCGGGG ATGGGGAGTA A
 
Protein sequence
MIVLILVFRL VIGEQMIDVL GPEKRRRRTT QEKIAIVQQS FEPGMTVSLV ARQHGVAASQ 
LFLWRKQYQE GSLTAVAAGE QVVPASELAA AMKQIKELQR LLGKKTMENE LLKEAVEYGR
AKKWIAHAPL LPGDGE