Gene EcSMS35_1883 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_1883 
Symbol 
ID6143116 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp1906146 
End bp1906745 
Gene Length600 bp 
Protein Length199 aa 
Translation table11 
GC content43% 
IMG OID641616760 
Producthypothetical protein 
Protein accessionYP_001743938 
Protein GI170682453 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.00156708 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCTTGTTG GCGTCAGTGT TGATCGCCGG CAATGTCATC ATCGGTTTAA CCCGGACATC 
AGCGCCGGGG AAAATCCGGT GAACCCTCTT GGTCAACTCG CCCAGAATGA TATCTTTTGC
ACCGGGCAGT CCATCAAAAT TCCTTTTGCC ATAAACGAGT TCCACGAACA TTGCTCATTG
CCTCTTTACT GGGTGTATAT ACAGTATTTA TACTGTGTTT TTATCCGGTA TTCAAGAGAG
GGCGTAATGA TGCCACGACG CAGCGATATT GAAATAGCCT GGTATTCTTC GATACAGCAA
GAGCCGAATG GCCGGAAGAC CGTCACTACA CAGCGATTTG TTCAGGGGTT GAGCAAAGTT
AACTGGGAAT TCTCACTCAA AGATGCTAAT GCCTGGATCG AATCCAGCGT GAGCACTTTT
AAATATTTAT CAATGGTAGA GGGGGAAGAA CGCACTTTCA TGCTCTATAG CCTTGATTTA
TGCGATGCAC ATTTCCACAA CCTAGTCAGG ACAACCTCTT TTCTAATAAA ATGTAGATGC
CTAATTTTAG GCGTCTACAT AATTAATGAT GATTTATTAC AATTATTTTC TAGATACTAA
 
Protein sequence
MLVGVSVDRR QCHHRFNPDI SAGENPVNPL GQLAQNDIFC TGQSIKIPFA INEFHEHCSL 
PLYWVYIQYL YCVFIRYSRE GVMMPRRSDI EIAWYSSIQQ EPNGRKTVTT QRFVQGLSKV
NWEFSLKDAN AWIESSVSTF KYLSMVEGEE RTFMLYSLDL CDAHFHNLVR TTSFLIKCRC
LILGVYIIND DLLQLFSRY