Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_1883 |
Symbol | |
ID | 6143116 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010498 |
Strand | - |
Start bp | 1906146 |
End bp | 1906745 |
Gene Length | 600 bp |
Protein Length | 199 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 641616760 |
Product | hypothetical protein |
Protein accession | YP_001743938 |
Protein GI | 170682453 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.00156708 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCTTGTTG GCGTCAGTGT TGATCGCCGG CAATGTCATC ATCGGTTTAA CCCGGACATC AGCGCCGGGG AAAATCCGGT GAACCCTCTT GGTCAACTCG CCCAGAATGA TATCTTTTGC ACCGGGCAGT CCATCAAAAT TCCTTTTGCC ATAAACGAGT TCCACGAACA TTGCTCATTG CCTCTTTACT GGGTGTATAT ACAGTATTTA TACTGTGTTT TTATCCGGTA TTCAAGAGAG GGCGTAATGA TGCCACGACG CAGCGATATT GAAATAGCCT GGTATTCTTC GATACAGCAA GAGCCGAATG GCCGGAAGAC CGTCACTACA CAGCGATTTG TTCAGGGGTT GAGCAAAGTT AACTGGGAAT TCTCACTCAA AGATGCTAAT GCCTGGATCG AATCCAGCGT GAGCACTTTT AAATATTTAT CAATGGTAGA GGGGGAAGAA CGCACTTTCA TGCTCTATAG CCTTGATTTA TGCGATGCAC ATTTCCACAA CCTAGTCAGG ACAACCTCTT TTCTAATAAA ATGTAGATGC CTAATTTTAG GCGTCTACAT AATTAATGAT GATTTATTAC AATTATTTTC TAGATACTAA
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Protein sequence | MLVGVSVDRR QCHHRFNPDI SAGENPVNPL GQLAQNDIFC TGQSIKIPFA INEFHEHCSL PLYWVYIQYL YCVFIRYSRE GVMMPRRSDI EIAWYSSIQQ EPNGRKTVTT QRFVQGLSKV NWEFSLKDAN AWIESSVSTF KYLSMVEGEE RTFMLYSLDL CDAHFHNLVR TTSFLIKCRC LILGVYIIND DLLQLFSRY
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