| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_1880 |
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| Symbol | tonB |
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| ID | 6145010 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | - |
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| Start bp | 1902601 |
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| End bp | 1903332 |
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| Gene Length | 732 bp |
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| Protein Length | 243 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 641616756 |
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| Product | transport protein TonB |
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| Protein accession | YP_001743934 |
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| Protein GI | 170681605 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0810] Periplasmic protein TonB, links inner and outer membranes |
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| TIGRFAM ID | [TIGR01352] TonB family C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.000508248 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGATTATGA CTTCAATGAC CCTTGATTTA CCTCGCCGCT TCCCCTGGCC GACGTTACTT
TCGGTCTGCA TTCATGGTGC TGTTGTGGCG GGTTTGATCT ATACCTCGGT ACATCAGGTT
ATTGAACTAC CTGCGCCCGC GCAGCCGATT TCTGTCACGA TGGTTGCGCC AGCGGATCTC
GAACCGCCAC AAGCCGTTCA ACCACCACCG GAGCCGGTGG TAGAGCCAGA ACCGGAACCT
GAGCCGATCC CTGAACCGCC AAAAGAAGCT CCGGTGGTCA TTGAAAAGCC GAAGCCGAAA
CCTAAGCCAA AACCGAAGCC GGTGAAAAAG GTGGAGCAGC CAAAACGCGA TGTCAAACCC
GTAGAGTCGC GTCCGGCATC ACCGTTTGAA AATACGGCAC CCGCGCGCCC GACATCAAGT
ACGGCAACGG CTGCAACCAG CAAGCCGGTT ACCAGTGTGG CTTCAGGACC ACGCGCATTA
AGCCGTAATC AGCCGCAGTA TCCGGCACGA GCACAGGCAT TGCGCATTGA AGGGCAGGTT
AAAGTTAAAT TTGATGTCAC GCCAGATGGT CGCGTGGATA ACGTACAAAT CCTCTCAGCC
AAGCCTGCGA ACATGTTTGA GCGTGAAGTG AAAAATGCGA TGCGCAGATG GCGTTATGAG
CCGGGTAAGC CAGGCAGTGG GATTGTGGTG AATATCCTGT TTAAAATTAA CGGCACTACC
GAAATTCAGT AA
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| Protein sequence | MIMTSMTLDL PRRFPWPTLL SVCIHGAVVA GLIYTSVHQV IELPAPAQPI SVTMVAPADL
EPPQAVQPPP EPVVEPEPEP EPIPEPPKEA PVVIEKPKPK PKPKPKPVKK VEQPKRDVKP
VESRPASPFE NTAPARPTSS TATAATSKPV TSVASGPRAL SRNQPQYPAR AQALRIEGQV
KVKFDVTPDG RVDNVQILSA KPANMFEREV KNAMRRWRYE PGKPGSGIVV NILFKINGTT
EIQ
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