| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_1878 |
|---|
| Symbol | ispZ |
|---|
| ID | 6143618 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli SMS-3-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010498 |
|---|
| Strand | + |
|---|
| Start bp | 1901519 |
|---|
| End bp | 1902058 |
|---|
| Gene Length | 540 bp |
|---|
| Protein Length | 179 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 641616754 |
|---|
| Product | intracellular septation protein A |
|---|
| Protein accession | YP_001743932 |
|---|
| Protein GI | 170680207 |
|---|
| COG category | [D] Cell cycle control, cell division, chromosome partitioning |
|---|
| COG ID | [COG2917] Intracellular septation protein A |
|---|
| TIGRFAM ID | [TIGR00997] intracellular septation protein A |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 0.000132435 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCAGT TTCTTGATTT TTTACCGCTG GTTGTCTTTT TCGCGTTCTA CAAGATTTAT
GACATCTATG CGGCTACTGC GGCGCTCATC GTCGCCACGG CGATTGTGCT TATCTATAGC
TGGGTTCGCT TTCGTAAGGT TGAGAAGATG GCCCTGATCA CTTTTGTTCT GGTGGTCGTC
TTCGGTGGCT TAACGCTGTT CTTCCACAAT GATGAGTTTA TTAAATGGAA GGTTACTGTC
ATTTATGCCC TGTTTGCGGG TGCCCTGTTA GTCAGTCAAT GGGTGATGAA AAAGCCGCTA
ATTCAGCGGA TGCTGGGTAA AGAACTCACC CTGCCGCAAT CGGTATGGTC GAAGCTGAAT
CTGGCCTGGG CTGTTTTCTT TATCCTTTGC GGCCTGGCAA ACATCTACAT CGCATTCTGG
CTGCCGCAAA ATATTTGGGT CAACTTTAAA GTCTTTGGCC TGACCGCCCT TACCTTAATC
TTCACATTGT TAAGCGGTAT CTATATCTAC CGCCACATGC CGCAGGAAGA TAAATCCTAA
|
|---|
| Protein sequence | MKQFLDFLPL VVFFAFYKIY DIYAATAALI VATAIVLIYS WVRFRKVEKM ALITFVLVVV
FGGLTLFFHN DEFIKWKVTV IYALFAGALL VSQWVMKKPL IQRMLGKELT LPQSVWSKLN
LAWAVFFILC GLANIYIAFW LPQNIWVNFK VFGLTALTLI FTLLSGIYIY RHMPQEDKS
|
|---|
| |