Gene EcSMS35_1877 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_1877 
Symbol 
ID6146548 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp1900746 
End bp1901489 
Gene Length744 bp 
Protein Length247 aa 
Translation table11 
GC content49% 
IMG OID641616753 
Producthypothetical protein 
Protein accessionYP_001743931 
Protein GI170684316 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.00001512 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTCTATCA CGGCGCAGTC CGTATACCGT GACACCGGAA ATTTCTTCCG TAATCAATTT 
ATGACCATTC TGTTGGTATC GTTGCTATGT GCGTTTATCA CAGTGGTGTT AGGGCATGTT
TTCTCACCCA GTGATGCACA GCTTGCTCAG CTCAATGACG GCGTGCCCGT TAGCGGCAGT
AGTGGGTTGT TCGACCTGGT TCAGAATATG TCACCTGAAC AGCAACAAAT TTTGCTGCAG
GCTTCAGCGG CGTCCACTTT TTCAGGATTA ATCGGTAACG CCATTCTAGC CGGAGGCGTA
ATATTAATTA TCCAGCTGGT GTCTGCGGGT CAGAGAGTCA GTGCGCTTCG AGCTATTGGT
GCCAGTGCGC CGATATTGCC AAAGTTATTT ATTCTGATTT TTCTGACTAC CCTTTTAGTA
CAGATTGGCA TCATGCTGGT GGTCGTTCCG GGAATTATCA TGGCCATTTT ACTGGCTCTG
GCACCGGTGA TGTTGGTACA GGACAAAATG GGCATTTTTG CCTCGATGCG TAGCAGTATG
CGGCTGACAT GGGCGAATAT GCGTCTGGTG GCACCCGCAG TACTGAGCTG GTTGCTGGCA
AAAACACTGT TGCTGCTTTT TGCCTCTTCT TTTGCCGCAT TAACCCCGGA AATTGGTGCC
GTACTGGCGA ACACCTTGAG CAACCTGATT TCAGCCGTAT TGCTCATCTA TCTGTTCCGC
CTGTATATGT TGATTCGCCA ATAA
 
Protein sequence
MSITAQSVYR DTGNFFRNQF MTILLVSLLC AFITVVLGHV FSPSDAQLAQ LNDGVPVSGS 
SGLFDLVQNM SPEQQQILLQ ASAASTFSGL IGNAILAGGV ILIIQLVSAG QRVSALRAIG
ASAPILPKLF ILIFLTTLLV QIGIMLVVVP GIIMAILLAL APVMLVQDKM GIFASMRSSM
RLTWANMRLV APAVLSWLLA KTLLLLFASS FAALTPEIGA VLANTLSNLI SAVLLIYLFR
LYMLIRQ