Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_1877 |
Symbol | |
ID | 6146548 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010498 |
Strand | + |
Start bp | 1900746 |
End bp | 1901489 |
Gene Length | 744 bp |
Protein Length | 247 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 641616753 |
Product | hypothetical protein |
Protein accession | YP_001743931 |
Protein GI | 170684316 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.00001512 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGTCTATCA CGGCGCAGTC CGTATACCGT GACACCGGAA ATTTCTTCCG TAATCAATTT ATGACCATTC TGTTGGTATC GTTGCTATGT GCGTTTATCA CAGTGGTGTT AGGGCATGTT TTCTCACCCA GTGATGCACA GCTTGCTCAG CTCAATGACG GCGTGCCCGT TAGCGGCAGT AGTGGGTTGT TCGACCTGGT TCAGAATATG TCACCTGAAC AGCAACAAAT TTTGCTGCAG GCTTCAGCGG CGTCCACTTT TTCAGGATTA ATCGGTAACG CCATTCTAGC CGGAGGCGTA ATATTAATTA TCCAGCTGGT GTCTGCGGGT CAGAGAGTCA GTGCGCTTCG AGCTATTGGT GCCAGTGCGC CGATATTGCC AAAGTTATTT ATTCTGATTT TTCTGACTAC CCTTTTAGTA CAGATTGGCA TCATGCTGGT GGTCGTTCCG GGAATTATCA TGGCCATTTT ACTGGCTCTG GCACCGGTGA TGTTGGTACA GGACAAAATG GGCATTTTTG CCTCGATGCG TAGCAGTATG CGGCTGACAT GGGCGAATAT GCGTCTGGTG GCACCCGCAG TACTGAGCTG GTTGCTGGCA AAAACACTGT TGCTGCTTTT TGCCTCTTCT TTTGCCGCAT TAACCCCGGA AATTGGTGCC GTACTGGCGA ACACCTTGAG CAACCTGATT TCAGCCGTAT TGCTCATCTA TCTGTTCCGC CTGTATATGT TGATTCGCCA ATAA
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Protein sequence | MSITAQSVYR DTGNFFRNQF MTILLVSLLC AFITVVLGHV FSPSDAQLAQ LNDGVPVSGS SGLFDLVQNM SPEQQQILLQ ASAASTFSGL IGNAILAGGV ILIIQLVSAG QRVSALRAIG ASAPILPKLF ILIFLTTLLV QIGIMLVVVP GIIMAILLAL APVMLVQDKM GIFASMRSSM RLTWANMRLV APAVLSWLLA KTLLLLFASS FAALTPEIGA VLANTLSNLI SAVLLIYLFR LYMLIRQ
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