| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_1870 |
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| Symbol | trpC |
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| ID | 6143856 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | + |
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| Start bp | 1894624 |
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| End bp | 1895985 |
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| Gene Length | 1362 bp |
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| Protein Length | 453 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 641616746 |
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| Product | bifunctional indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase |
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| Protein accession | YP_001743924 |
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| Protein GI | 170683763 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0134] Indole-3-glycerol phosphate synthase
[COG0135] Phosphoribosylanthranilate isomerase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.000000113165 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGATGCAAA CCGTTTTAGC GAAAATCGTC GCAGACAAGG CGATTTGGGT AGAAACCCGC
AAAGAGCAGC AACCGCTGGC CAGTTTTCAG AATGAGGTTC AGCCGAGCAC GCGACATTTT
TATGATGCAC TTCAGGGCGC ACGCACGGCG TTTATTCTGG AGTGTAAAAA AGCGTCGCCG
TCAAAAGGCG TGATCCGTGA TGATTTCGAT CCGGCACGCA TTGCAACCGT CTACAGAAAT
TACGCTTCGG CAATTTCGGT GCTGACTGAC GAGAAATATT TTCAGGGGAG CTTTGATTTC
CTCCCCATTG TCAGCCAAAT CGCCCCACAG CCGATTTTAT GTAAAGACTT TATTATCGAC
CCTTACCAGA TCTATCTGGC GCGCTATTAC CAGGCTGATG CCTGCTTATT AATGCTTTCA
GTACTGGATG ACGAACAATA TCGCCAGCTT GCCGCCGTCG CCCACAGTCT GGAGATGGGT
GTGCTGACCG AAGTCAGTAA TGAAGAGGAA CTGGAGCGCG CCATTGCATT GGGGGCAAAG
GTCGTTGGCA TCAACAACCG CGATCTGCGC GATTTGTCGA TTGATCTCAA CCGTACCCGC
GAGCTTGCAC CGAAACTGGG GCACAACGTG ACGGTAATCA GCGAATCCGG CATCAATACT
TACGCTCAGG TGCGCGAGTT AAGCCACTTC GCTAACGGTT TTCTGATTGG TTCGGCGTTG
ATGGCCCATG ACGATTTGAA CGCCGCCGTG CGCCGGGTGT TGCTGGGTGA GAATAAAGTG
TGTGGCCTGA CGCGTGGGCA AGATGCTAAA GCAGCTTATG ACGCGGGCGC GATTTACGGT
GGGTTGATTT TTGTTGCGAC ATCACCGCGT TGCGTCAACG TTGAACAGGC GCAGGAAGTG
ATGGCTGCGG CACCGTTGCA GTATGTTGGC GTGTTCCGCA ATCACGATAT TGCCGATGTG
GTGGACAAAG CTAAGGTGTT ATCGCTGGCG GCAGTGCAAC TGCATGGTAA AGAAGATCAG
CTGTATATCG ACACTCTGCG TGAGGCTCTG CCAGCACACG TCGCCATCTG GAAGGCTTTA
AGTGTCGGTG AAACTCTTCC CGCGCGCGAT TTTCAGCACA TCGATAAATA TGTATTCGAC
AACGGTCAGG GCGGGAGCGG ACAACGTTTC GACTGGTCAC TATTAAATGG TCAATCGCTT
GGCAACGTTC TGCTGGCGGG GGGCTTAGGC GCAGATAACT GCGTGGAAGC GGCACAAACC
GGCTGCGCCG GACTTGATTT TAATTCTGCT GTAGAGTCGC AACCGGGCAT CAAAGACGCA
CGTCTTTTGG CCTCGGTTTT CCAGACGCTG CGCGCATATT AA
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| Protein sequence | MMQTVLAKIV ADKAIWVETR KEQQPLASFQ NEVQPSTRHF YDALQGARTA FILECKKASP
SKGVIRDDFD PARIATVYRN YASAISVLTD EKYFQGSFDF LPIVSQIAPQ PILCKDFIID
PYQIYLARYY QADACLLMLS VLDDEQYRQL AAVAHSLEMG VLTEVSNEEE LERAIALGAK
VVGINNRDLR DLSIDLNRTR ELAPKLGHNV TVISESGINT YAQVRELSHF ANGFLIGSAL
MAHDDLNAAV RRVLLGENKV CGLTRGQDAK AAYDAGAIYG GLIFVATSPR CVNVEQAQEV
MAAAPLQYVG VFRNHDIADV VDKAKVLSLA AVQLHGKEDQ LYIDTLREAL PAHVAIWKAL
SVGETLPARD FQHIDKYVFD NGQGGSGQRF DWSLLNGQSL GNVLLAGGLG ADNCVEAAQT
GCAGLDFNSA VESQPGIKDA RLLASVFQTL RAY
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