| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_1869 |
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| Symbol | trpD |
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| ID | 6144331 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | + |
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| Start bp | 1893028 |
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| End bp | 1894623 |
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| Gene Length | 1596 bp |
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| Protein Length | 531 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 641616745 |
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| Product | bifunctional glutamine amidotransferase/anthranilate phosphoribosyltransferase |
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| Protein accession | YP_001743923 |
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| Protein GI | 170679698 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0512] Anthranilate/para-aminobenzoate synthases component II
[COG0547] Anthranilate phosphoribosyltransferase |
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| TIGRFAM ID | [TIGR00566] glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase
[TIGR01245] anthranilate phosphoribosyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.0000000144467 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCTGACA TTCTGCTGCT CGATAATATC GATTCTTTTA CTTACAACCT GGCAGATCAG
TTGCGCAGCA ATGGTCATAA CGTGGTGATT TACCGCAACC ATATTCCGGC GCAGACCTTA
ATTGAACGCC TGGCGACGAT GAGCAATCCG GTGCTGATGC TCTCTCCTGG CCCCGGTGTG
CCGAGCGAAG CCGGTTGTAT GCCGGAACTC CTCACCCGCC TGCGCGGCAA GCTGCCAATT
ATTGGCATTT GCCTCGGTCA TCAGGCGATT GTCGAAGCTT ACGGGGGCTA TGTCGGTCAG
GCGGGCGAAA TTCTTCACGG TAAAGCGTCG AGCATTGAAC ATGACGGTCA GGCGATGTTT
GCCGGATTAA CAAACCCGCT GCCAGTGGCG CGTTATCACT CGCTGGTTGG CAGTAATATT
CCGGCAGGTT TAACCATCAA CGCCCATTTT AATGGCATGG TGATGGCGGT GCGCCATGAT
GCGGATCGCG TTTGTGGATT CCAGTTCCAT CCGGAATCCA TTCTTACTAC CCAGGGCGCT
CGCCTGCTGG AACAAACGCT GGCCTGGGCG CAGCAGAAAC TAGAGCCAAC CAACACGCTG
CAACCGATTC TGGAAAAACT GTATCAGGCG CAGACCCTTA GTCAGCAGGA AAGCCACCAG
CTATTTTCAG CGGTGGTGCG TGGCGAACTG AAACCGGAAC AACTGGCGGC GGCGCTGGTG
AGCATGAAAA TTCGCGGCGA GCACCCGAAT GAAATCGCCG GGGCAGCAAC CGCGCTACTG
GAAAACGCCG CGCCGTTCCC GCGCCCGGAT TATCTGTTTG CCGATATCGT CGGTACTGGC
GGTGACGGCA GCAACAGTAT CAATATTTCT ACCGCCAGTG CGTTTGTCGC CGCGGCCTGC
GGGCTGAAAG TGGCGAAACA CGGCAACCGT AGCGTCTCCA GTAAATCCGG CTCGTCGGAT
CTGCTGGCGG CGTTCGGTAT TAATCTTGAT ATGAACGCCG ATAAATCGCG CCAGGCGCTG
GATGAGTTAG GCGTCTGTTT CCTCTTTGCG CCGAAATATC ACACCGGATT CCGCCATGCA
ATGCCGGTTC GCCAGCAACT GAAAACCCGC ACCCTGTTCA ATGTTCTGGG GCCATTAATT
AACCCGGCGC ATCCTCCGCT GGCGTTAATT GGTGTCTACA GCCCGGAGCT GGTGCTGCCG
ATTGCCGAAA CCTTGCGCGT GCTGGGGTAT CAACGCGCGG CGGTGGTGCA CAGCGGCGGG
ATGGATGAAG TTTCATTACA CGCGCCGACA ATCGTTGCCG AACTGCATGA CGGCGAAATT
AAAAGCTATC AGCTCACCGC AGAAGACTTT GGCCTGACAC CCTACCACCA GGAGCAATTG
GCAGGCGGAA CACCGGAAGA AAACCGTGAC ATTTTAACAC GCTTGTTACA AGGTAAAGGC
GACGCCGCCC ATGAAGCAGC CGTCGCGGCG AATGTCGCCA TGTTAATGCG CCTGCATGGC
CATGAAGATC TGCAAGCCAA TGCGCAAACC GTTCTTGAGG TACTGCGCAG TGGTTCCGCT
TACGACAGAG TCACCGCACT GGCGGCACGA GGGTAA
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| Protein sequence | MADILLLDNI DSFTYNLADQ LRSNGHNVVI YRNHIPAQTL IERLATMSNP VLMLSPGPGV
PSEAGCMPEL LTRLRGKLPI IGICLGHQAI VEAYGGYVGQ AGEILHGKAS SIEHDGQAMF
AGLTNPLPVA RYHSLVGSNI PAGLTINAHF NGMVMAVRHD ADRVCGFQFH PESILTTQGA
RLLEQTLAWA QQKLEPTNTL QPILEKLYQA QTLSQQESHQ LFSAVVRGEL KPEQLAAALV
SMKIRGEHPN EIAGAATALL ENAAPFPRPD YLFADIVGTG GDGSNSINIS TASAFVAAAC
GLKVAKHGNR SVSSKSGSSD LLAAFGINLD MNADKSRQAL DELGVCFLFA PKYHTGFRHA
MPVRQQLKTR TLFNVLGPLI NPAHPPLALI GVYSPELVLP IAETLRVLGY QRAAVVHSGG
MDEVSLHAPT IVAELHDGEI KSYQLTAEDF GLTPYHQEQL AGGTPEENRD ILTRLLQGKG
DAAHEAAVAA NVAMLMRLHG HEDLQANAQT VLEVLRSGSA YDRVTALAAR G
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