| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_1847 |
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| Symbol | pyrF |
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| ID | 6145163 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | - |
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| Start bp | 1870307 |
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| End bp | 1871044 |
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| Gene Length | 738 bp |
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| Protein Length | 245 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 641616723 |
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| Product | orotidine 5'-phosphate decarboxylase |
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| Protein accession | YP_001743901 |
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| Protein GI | 170680162 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0284] Orotidine-5'-phosphate decarboxylase |
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| TIGRFAM ID | [TIGR01740] orotidine 5'-phosphate decarboxylase, subfamily 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.000000882448 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 1.27395e-19 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACGTTAA CTGCTTCATC TTCTTCCCGC GCTGTTACGA ATTCTCCTGT GGTTGTTGCC
CTTGATTATC ATAATCGTGA TGCCGCGCTG GCCTTTGTCG ACAAGATCGA CCCACGCGAT
TGTCGTCTGA AAGTCGGCAA AGAGATGTTT ACGCTGTTTG GACCTCAATT TGTACGCGAA
CTTCAACAGC GTGGTTTTGA TATCTTCCTC GACCTGAAAT TTCACGATAT TCCCAACACT
GCAGCGCACG CTGTCGCTGC TGCAGCTGAC TTAGGCGTGT GGATGGTGAA TGTTCACGCC
TCCGGTGGGG CGCGTATGAT GACCGCAGCG CGTGAGGCAC TGGTTCCGTT TGGCAAAGAT
GCACCGCTTT TGATTGCTGT GACAGTATTG ACCAGCATGG AAGCCAGCGA CCTGGCCGAT
CTTGGCGTGA CACTGTCACC TGCAGATTAT GCAGAACGTC TGGCGGCACT GACGCAAAAA
TGTGGCCTTG ATGGTGTGGT GTGTTCTGCT CAGGAAGCTG TGCGCTTTAA ACAGGTATTC
GGTCAGGAGT TCAAACTGGT TACACCGGGC ATTCGTCCGC AGGGGAGTGA AGCAGGTGAC
CAGCGCCGCA TTATGACGCC AGAACAGGCG TTGGCGGCTG GTGTTGATTA TATGGTGATT
GGTCGCCCGG TAACGCAATC GGTAGATCCA GCGCAGACGC TGAAAGCGAT CAACGCCTCT
TTACAGCGGA GTGCATGA
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| Protein sequence | MTLTASSSSR AVTNSPVVVA LDYHNRDAAL AFVDKIDPRD CRLKVGKEMF TLFGPQFVRE
LQQRGFDIFL DLKFHDIPNT AAHAVAAAAD LGVWMVNVHA SGGARMMTAA REALVPFGKD
APLLIAVTVL TSMEASDLAD LGVTLSPADY AERLAALTQK CGLDGVVCSA QEAVRFKQVF
GQEFKLVTPG IRPQGSEAGD QRRIMTPEQA LAAGVDYMVI GRPVTQSVDP AQTLKAINAS
LQRSA
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