Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_1844 |
Symbol | |
ID | 6144883 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010498 |
Strand | + |
Start bp | 1868619 |
End bp | 1869368 |
Gene Length | 750 bp |
Protein Length | 249 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 641616720 |
Product | DeoR family transcriptional regulator |
Protein accession | YP_001743898 |
Protein GI | 170683876 |
COG category | [G] Carbohydrate transport and metabolism [K] Transcription |
COG ID | [COG1349] Transcriptional regulators of sugar metabolism |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.000849222 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 4.81659e-17 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAATTCCC GACAACAAAC TATTCTACAG ATGGTCATTG ACCAGGGTCA GGTTAGCGTA ACCGATCTGG CAAAAGCCAC TGGAGTTTCT GAAGTTACCA TTCGCCAGGA TCTCAACACC CTCGAAAAAC TGAGTTACCT CCGCCGTGCA CATGGCTTTG CAGTATCGCT TGATAGTGAT GACGTCGAAA CTCGTATGAT GAGCAACTAT ACGCTGAAGC GTGAACTCGC TGAGTTTGCC GCGTCACTGG TTCAACCGGG CGAAACCATC TTTATCGAAA ATGGCAGCAG CAATGCCCTG CTCGCCCGGA CTCTGGGCGA GCAGAAGAAA AATGTCACGA TCATCACGGT CAGCAGCTAC ATCGCGCATT TGCTGAAAGA CGCGCCTTGT GAAGTTATTT TGCTCGGTGG CGTGTACCAG AAAAAAAGCG AAAGTATGGT TGGTCCTTTG ACACGCCAGT GCATCCAACA GGTGCATTTC AGCAAAGCAT TTATTGGTAT TGATGGCTGG CAACCTGAAA CTGGGTTTAC CGGTCGCGAT ATGATGCGTA CCGATGTGGT CAATGCCGTG CTGGAAAAAG AGTGCGAGGC GATAGTCCTG ACTGACAGCT CGAAATTTGG TGCTGTACAT TCATACTCCA TCGGCCCCGT TGAGCGATTC AATCGCGTGA TTACCGATTC GAAAATACGC GCCAGCGATC TGATGCATCT TGAGCACAGT AAACTCACCG TTCACGTCGT TGACATTTAA
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Protein sequence | MNSRQQTILQ MVIDQGQVSV TDLAKATGVS EVTIRQDLNT LEKLSYLRRA HGFAVSLDSD DVETRMMSNY TLKRELAEFA ASLVQPGETI FIENGSSNAL LARTLGEQKK NVTIITVSSY IAHLLKDAPC EVILLGGVYQ KKSESMVGPL TRQCIQQVHF SKAFIGIDGW QPETGFTGRD MMRTDVVNAV LEKECEAIVL TDSSKFGAVH SYSIGPVERF NRVITDSKIR ASDLMHLEHS KLTVHVVDI
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