| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_1836 |
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| Symbol | eefA |
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| ID | 6143081 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | - |
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| Start bp | 1859612 |
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| End bp | 1860733 |
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| Gene Length | 1122 bp |
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| Protein Length | 373 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 641616712 |
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| Product | multidrug efflux transport protein EefA |
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| Protein accession | YP_001743890 |
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| Protein GI | 170683115 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.0000000609578 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAGTATA TAGCAACATC TGTAGTGGCA ATGCTGCTCT TATCGGGTTG CGATAATACG
CAAAGTAACA ATTCATCCCC GTCAGAAACA GAAGTCGGCG TTGTTACACT CAAATCTCAA
CCGGTTTCGG TAGTCAGTGA ATTAACCGGA CGCACCAGTG CTGCGCTCAG TGCCGAAGTA
CGTCCGCAGG TTGGGGGAAT TATCCAGAAA CGCTTATTTA AGGAAGGTGA TCTGGTCAAG
GCTGGACAGC CGCTCTACCA GATTGATGCG GCCAGTTATC AGGCTGCATG GAATGAAGCC
CGGGCAGCAT TACAACAAGC ACAGGCACTG GTAAAAGCCG ATTGCCAGAA AGCGCAGCGT
TATGCTCGAC TGGTGAAAGA GAACGGTGTT TCACAACAGG ATGCTGATGA TGCTCAGTCT
ACCTGTGCAC AAGATAAAGC CAGTGTAGAG GCGAAAAAAG CCGCACTGGA AACTGCGCGC
ATTAATCTTG ACTGGACCAC GGTAACCGCA CCGATTTCAG GGCGCATTGG CATTTCGTCG
GTAACCCCTG GCGCACTGGT GACCGCGTCG CAAGATACAG CGTTAACGAC GATTCGTGGT
CTGGATACAA TGTATGTCGA CCTCACTCGC TCCAGTGTCG ATTTATTACG TCTGCGTAAA
CAGTCACTGG CGACCAACAG TGACACCATG AGCGTCTCAC TTATTCTGGA AGATGGCACA
ACCTACAGCG AAAAAGGGCG TCTGGAACTC ACCGAAGTCG CGGTGGATGA GTCTACCGGT
TCGGTGACAT TACGGGCAAT TTTCCCCAAT CCACAACAGC AGTTATTACC GGGAATGTTT
GTTCGCGCTC GTGTCGATGA AGGCGTGATG GAAGACGCTA TTCTCGCGCC TCAACAGGGC
GTCACGCGCG ATGCTAAAGG CAATGCAACT GCGCTGGTGG TGAATAAAGA CAATAAAGTA
GAGCAGCGAG CGCTCGAAAC GGGAGAAACG TATGGTGATA AATGGCTGGT GCTGAACGGC
CTGCACAACG GCGACCGACT GATTGTTGAA GGTTCTGCCA AAGTCACTTC AGGGCAGACC
GTCAAGGCTG TTGAAGTTCA GGCTAATGGA GGCAACGCCT GA
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| Protein sequence | MKYIATSVVA MLLLSGCDNT QSNNSSPSET EVGVVTLKSQ PVSVVSELTG RTSAALSAEV
RPQVGGIIQK RLFKEGDLVK AGQPLYQIDA ASYQAAWNEA RAALQQAQAL VKADCQKAQR
YARLVKENGV SQQDADDAQS TCAQDKASVE AKKAALETAR INLDWTTVTA PISGRIGISS
VTPGALVTAS QDTALTTIRG LDTMYVDLTR SSVDLLRLRK QSLATNSDTM SVSLILEDGT
TYSEKGRLEL TEVAVDESTG SVTLRAIFPN PQQQLLPGMF VRARVDEGVM EDAILAPQQG
VTRDAKGNAT ALVVNKDNKV EQRALETGET YGDKWLVLNG LHNGDRLIVE GSAKVTSGQT
VKAVEVQANG GNA
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