| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_1829 |
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| Symbol | sapB |
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| ID | 6143603 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | + |
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| Start bp | 1850265 |
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| End bp | 1851230 |
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| Gene Length | 966 bp |
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| Protein Length | 321 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 641616705 |
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| Product | peptide ABC transporter, permease protein SapB |
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| Protein accession | YP_001743883 |
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| Protein GI | 170683242 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG4168] ABC-type antimicrobial peptide transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.000908209 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGATTATCT TCACCTTACG CCGTATTTTG TTATTGATTG TCACCTTGTT CCTGCTGACC
TTCGTTGGCT TCAGCTTGAG CTATTTCACC CCACATGCGC CGTTACAAGG CGCGTCACTG
TGGAATGCCT GGGTGTTCTG GTTTAACGGC CTGATCCACT GGGATTTTGG TGTTTCCAGC
ATTAACGGTC AACCGATTGC CGAACAGTTA AAAGAGGTCT TCCCGGCGAC GATGGAGCTG
TGCATCCTCG CCTTTGGTTT TGCGCTGATT GTTGGCATCC CCATGGGAAT GATTGCCGGG
ATTACGCGCC ATAAGTGGCA GGATAACTTG ATCAACGCCA TCGCCTTACT GGGCTTTTCA
ATCCCGGTGT TCTGGCTGGC GCTTCTGCTG ACGCTGTTTT GTTCACTCAC GCTAGGTTGG
TTGCCCGTTT CTGGGCGTTT CGATTTGCTC TACGAAGTGA AACCGATTAC CGGTTTTGCG
TTGATTGATG CCTGGCTTTC GGACTCACCG TGGCGGGATG AAATGGTCAT GAGCGCAATT
CGCCATATGA TATTACCCGT GATCACCCTG TCGGTTGCGC CAACAACTGA AGTGATCCGA
CTAATGCGTA TCAGCACTAT CGAAGTGTAT GACCAGAACT ATGTTAAAGC AGCGGCGACC
CGCGGTTTGT CGCGCTTTAC TATTTTGCGT CGCCACGTTC TGCATAACGC GTTACCTCCG
GTTATTCCTC GCCTGGGCTT ACAGTTTTCT ACCATGCTGA CGCTGGCGAT GATCACCGAA
ATGGTCTTTA GCTGGCCGGG TTTAGGGCGC TGGTTAATTA ACGCTATCCG CCAGCAGGAT
TACGCAGCCA TTTCCGCCGG AGTGATGGTG TGTGGCTCAC TGGTCATTAT TGTTAACGTG
ATTTCTGATA TTTTGGGTGC CATGGCTAAC CCTCTGAAAC ATAAGGAATG GTATGCCTTA
CGATAG
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| Protein sequence | MIIFTLRRIL LLIVTLFLLT FVGFSLSYFT PHAPLQGASL WNAWVFWFNG LIHWDFGVSS
INGQPIAEQL KEVFPATMEL CILAFGFALI VGIPMGMIAG ITRHKWQDNL INAIALLGFS
IPVFWLALLL TLFCSLTLGW LPVSGRFDLL YEVKPITGFA LIDAWLSDSP WRDEMVMSAI
RHMILPVITL SVAPTTEVIR LMRISTIEVY DQNYVKAAAT RGLSRFTILR RHVLHNALPP
VIPRLGLQFS TMLTLAMITE MVFSWPGLGR WLINAIRQQD YAAISAGVMV CGSLVIIVNV
ISDILGAMAN PLKHKEWYAL R
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