Gene EcSMS35_1823 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_1823 
SymbolpuuR 
ID6144339 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp1843267 
End bp1843824 
Gene Length558 bp 
Protein Length185 aa 
Translation table11 
GC content51% 
IMG OID641616699 
ProductDNA-binding transcriptional repressor PuuR 
Protein accessionYP_001743877 
Protein GI170680966 
COG category[K] Transcription 
COG ID[COG1396] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value0.0706879 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGATG AGGGACTGGC GCCAGGAAAA CGCTTGTCGG AAATCCGCCA GCAGCAGGGG 
CTTTCACAAC GTCGTGCCGC CGAACTCTCC GGGCTGACTC ACAGTGCTAT CAGTACGATA
GAACAAGATA AAGTCAGCCC TGCCATCAGT ACGCTGCAAA AGCTGCTGAA GGTGTATGGT
CTGTCACTCT CGGAATTCTT TTCCGAGCCG GAAAAACCTG ATGAGCCGCA GGTCGTCATT
AATCAGGACG ACTTAATTGA GATGGGCAGT CAGGGTGTGT CAATGAAGCT GGTTCATAAC
GGTAACCCGA ATCGCACGCT GGCGATGATC TTTGAAACGT ACCAGCCGGG CACAACCACT
GGGGAAAGAA TTAAGCATCA GGGTGAGGAA ATAGGCACTG TACTGGAAGG TGAAATTGTT
CTGACGATTA ATGGTCAGGA TTATCATCTC GTCGCGGGGC AAAGTTATGC CATTAATACC
GGCATCCCGC ACAGTTTCAG TAATACGTCG GCAGGTATTT GCCGAATTAT CAGCGCCCAT
ACGCCCACCA CGTTTTAA
 
Protein sequence
MSDEGLAPGK RLSEIRQQQG LSQRRAAELS GLTHSAISTI EQDKVSPAIS TLQKLLKVYG 
LSLSEFFSEP EKPDEPQVVI NQDDLIEMGS QGVSMKLVHN GNPNRTLAMI FETYQPGTTT
GERIKHQGEE IGTVLEGEIV LTINGQDYHL VAGQSYAINT GIPHSFSNTS AGICRIISAH
TPTTF