| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_1818 |
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| Symbol | pspA |
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| ID | 6147051 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | - |
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| Start bp | 1837102 |
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| End bp | 1837770 |
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| Gene Length | 669 bp |
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| Protein Length | 222 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 641616694 |
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| Product | phage shock protein PspA |
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| Protein accession | YP_001743872 |
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| Protein GI | 170680978 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG1842] Phage shock protein A (IM30), suppresses sigma54-dependent transcription |
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| TIGRFAM ID | [TIGR02977] phage shock protein A |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 0.264575 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGGTATTT TTTCTCGCTT TGCCGACATC GTGAATGCCA ACATCAACGC TCTGTTAGAG
AAAGCGGAAG ATCCACAGAA ACTGGTGCGT CTGATGATCC AGGAGATGGA AGATACATTG
GTTGAAGTAC GTTCTACTTC GGCGCGTGCG CTGGCAGAAA AGAAACAGCT GACTCGCCGT
ATTGAACAAG CGTCGGCTCG TGAAATTGAA TGGCAGGAAA AAGCGGAACT GGCACTGCTG
AAAGAGAGAG AGGATCTGGC GCGTGCGGCG TTAATTGAAA AACAGAAACT GACCGATCTG
ATTAAGAGCC TGGAACATGA AGTGACGCTG GTGGACGATA CGCTGGTGCG TATGAAGAAA
GAGATCGGCG AGCTGGAAAA CAAATTGAGC GAAACACGCG CTCGCCAGCA GGCATTGATG
TTACGCCATC AGGCGGCAAA CTCGTCGCGC GATGTGCGTC GTCAGCTGGA CAGTGGCAAA
CTGGATGAAG CAATGGCTCG TTTCGAATCT TTCGAACGCC GTATCGACCA GATGGAAGCG
GAAGCAGAAA GCCACAGCTT CGGTAAACAA AAATCGCTGG ACGATCAGTT TGCCGAACTG
AAAGCCGATG ATGCAATCAG CGAGCAACTG GCACAATTAA AAGCCAAAAT GAAGCAAGAC
AATCAATAA
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| Protein sequence | MGIFSRFADI VNANINALLE KAEDPQKLVR LMIQEMEDTL VEVRSTSARA LAEKKQLTRR
IEQASAREIE WQEKAELALL KEREDLARAA LIEKQKLTDL IKSLEHEVTL VDDTLVRMKK
EIGELENKLS ETRARQQALM LRHQAANSSR DVRRQLDSGK LDEAMARFES FERRIDQMEA
EAESHSFGKQ KSLDDQFAEL KADDAISEQL AQLKAKMKQD NQ
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