| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_1808 |
|---|
| Symbol | |
|---|
| ID | 6143506 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli SMS-3-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010498 |
|---|
| Strand | - |
|---|
| Start bp | 1829027 |
|---|
| End bp | 1829815 |
|---|
| Gene Length | 789 bp |
|---|
| Protein Length | 262 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 641616684 |
|---|
| Product | AP endonuclease |
|---|
| Protein accession | YP_001743862 |
|---|
| Protein GI | 170683456 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1082] Sugar phosphate isomerases/epimerases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 52 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAATAG GCACACAGAA TCAGGCATTC TTTCCGGAAA ATATTCTGGA GAAATTTCGT
TATATCAAAG AGATGGGCTT CGATGGTTTT GAGATTGACG GCAAACTGCT GGTCAACAAC
ATCGAAGAAG TCAAAGCGGC AATCAAAGAA ACCGGTTTAC CGGTGACCAC CGCCTGCGGT
GGCTATGACG GTTGGATTGG CGACTTTATC GAAGAGCGTC GACTTAATGG CTTAAAGCAG
ATCGAACGCA TTCTTGAAGC TCTGGCAGAA GTGGGCGGTA AAGGTATCGT CGTTCCGGCT
GCATGGGGCA TGTTTACCTT CCGCTTACCG CCGATGACCT CGCCGCGTAG CCTGGATGGC
GACCGCAAAA TGGTGAGTGA TTCCCTGCGC GTACTGGAAC AGGCGGCCGC ACGTACCGGA
ACCGTGGTGT ACCTCGAACC GTTAAACCGC TATCAGGATC ACATGATCAA CACCCTCGCC
GATGCTCGTC GTTACATCGT CGAAAACGAT CTTAAACATG TACAGATTAT CGGCGATTTC
TATCACATGA ATATCGAAGA AGATAACCTG GCGCAGGCGC TGCATGACAA CCGCGACCTG
CTCGGTCATG TGCATATTGC CGATAACCAT CGCTACCAGC CGGGCAGCGG CACCCTGGAT
TTCCACGCGC TGTTTGAACA GCTGCGCGCG GATAACTATC AGGGCTATGT GGTGTACGAA
GGGCGTATCC GGGCAGAAGA TCCTGCCCAG GCGTACCGTG ATTCTTTGGC CTGGTTGCGT
ACCTGCTAA
|
|---|
| Protein sequence | MKIGTQNQAF FPENILEKFR YIKEMGFDGF EIDGKLLVNN IEEVKAAIKE TGLPVTTACG
GYDGWIGDFI EERRLNGLKQ IERILEALAE VGGKGIVVPA AWGMFTFRLP PMTSPRSLDG
DRKMVSDSLR VLEQAAARTG TVVYLEPLNR YQDHMINTLA DARRYIVEND LKHVQIIGDF
YHMNIEEDNL AQALHDNRDL LGHVHIADNH RYQPGSGTLD FHALFEQLRA DNYQGYVVYE
GRIRAEDPAQ AYRDSLAWLR TC
|
|---|
| |