| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_1799 |
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| Symbol | tyrR |
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| ID | 6146845 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | - |
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| Start bp | 1817659 |
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| End bp | 1819200 |
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| Gene Length | 1542 bp |
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| Protein Length | 513 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 641616675 |
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| Product | DNA-binding transcriptional regulator TyrR |
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| Protein accession | YP_001743853 |
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| Protein GI | 170681764 |
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| COG category | [E] Amino acid transport and metabolism
[K] Transcription |
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| COG ID | [COG3283] Transcriptional regulator of aromatic amino acids metabolism |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.322981 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 54 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTCTGG AAGTCTTTTG TGAAGACCGA CTCGGTCTGA CCCGCGAATT ACTCGATCTA
CTCGTGCTAA GAGGCATTGA TTTACGCGGT ATTGAGATTG ATCCCATTGG GCGAATCTAC
CTCAATTTTG CTGAACTGGA GTTTGAGAGT TTCAGCAGTC TGATGGCCGA AATACGCCGT
ATTGCAGGTG TTACCGATGT GCGTACTGTC CCGTGGATGC CTTCCGAACG TGAGCATCTG
GCGTTGAGCG CGTTACTGGA GGCGTTGCCT GAACCTGTGC TCTCTGTCGA TATGAAAAGC
AAAGTGGATA TGGCGAACCC GGCGAGCTGT CAGCTTTTTG GGCAAAAATT GGATCGCCTG
CGCAACCATA CCGCCGCGCA ATTGATTAAC GGCTTTAATT TTTTACGCTG GCTGGAAAGC
GAACCGCAAG ATTCGCATAA CGAGCATGTC GTTATTAATG GGCAGAATTT CCTGATGGAG
ATTACGCCTG TTTATCTTCA GGATGAAAAT GATCAACACG TCCTGACCGG TGCGGTGGTG
ATGTTGCGAT CAACGATTCG TATGGGCCGT CAGTTGCAAA ATGTCGCTGC CCAGGACGTC
AGCGCCTTCA GTCAAATTGT CGCTGTCAGC CCGAAAATGA AGCATGTTGT CGAACAGGCG
CAGAAACTGG CGATGCTAAG CGCGCCACTG CTGATTACGG GTGATACCGG CACCGGAAAA
GATCTCTTTG CCTACGCCTG TCATCAGGCA AGCCCCAGAG CGAGCAAACC TTACCTGGCG
CTGAACTGTG CGTCTATACC GGAAGATGCG GTCGAGAGTG AACTGTTTGG TCATGCTCCG
GAAGGGAAGA AAGGGTTCTT TGAGCAGGCG AACGGTGGTT CGGTGCTGTT GGATGAAATA
GGGGAAATGT CACCACGGAT GCAGGCGAAA TTACTGCGTT TCCTTAATGA TGGCACCTTC
CGTCGGGTTG GCGAAGACCA TGAGGTGCAT GTCGATGTGC GGGTGATTTG TGCTACGCAG
AAGAATCTGG TCGAACTGGT GCAAAAAGGC GTGTTCCGTG AAGATCTCTA TTATCGTCTG
AACGTGTTGA CGCTCAATCT GCCGCCGCTA CGTGACTGTC CGCAGGACAT CATGCCGTTA
ACCGAGCTGT TCGTCGCCCG CTTTGCCGAC GAGCAGGGCG TGCCGCGTCC GAAACTGGCC
GCTGATCTGA ATACTGTACT TACGCGTTAT GCGTGGCCGG GAAATGTGCG GCAGTTAAAG
AACGCTATCT ATCGTGCACT GACACAACTG GACGGTTATG AGCTGCGTCC ACAGGATATT
TTGTTGCCGG ATTATGACGC CGCAACGGTA GCCGTGGGCG AAGATGCGAT GGAAGGTTCG
CTGGACGAAA TCACCAGCCG TTTTGAACGC TCGGTATTAA CCCAGCTTTA TCGCAATTAT
CCCAGCACGC GCAAACTGGC AAAACGTCTC GGCGTTTCAC ATACCGCGAT TGCCAATAAG
TTGCGGGAAT ATGGTCTGAG TCAGAAGAAG AACGAAGAGT AA
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| Protein sequence | MRLEVFCEDR LGLTRELLDL LVLRGIDLRG IEIDPIGRIY LNFAELEFES FSSLMAEIRR
IAGVTDVRTV PWMPSEREHL ALSALLEALP EPVLSVDMKS KVDMANPASC QLFGQKLDRL
RNHTAAQLIN GFNFLRWLES EPQDSHNEHV VINGQNFLME ITPVYLQDEN DQHVLTGAVV
MLRSTIRMGR QLQNVAAQDV SAFSQIVAVS PKMKHVVEQA QKLAMLSAPL LITGDTGTGK
DLFAYACHQA SPRASKPYLA LNCASIPEDA VESELFGHAP EGKKGFFEQA NGGSVLLDEI
GEMSPRMQAK LLRFLNDGTF RRVGEDHEVH VDVRVICATQ KNLVELVQKG VFREDLYYRL
NVLTLNLPPL RDCPQDIMPL TELFVARFAD EQGVPRPKLA ADLNTVLTRY AWPGNVRQLK
NAIYRALTQL DGYELRPQDI LLPDYDAATV AVGEDAMEGS LDEITSRFER SVLTQLYRNY
PSTRKLAKRL GVSHTAIANK LREYGLSQKK NEE
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