| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_1798 |
|---|
| Symbol | tpx |
|---|
| ID | 6146107 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli SMS-3-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010498 |
|---|
| Strand | + |
|---|
| Start bp | 1817109 |
|---|
| End bp | 1817615 |
|---|
| Gene Length | 507 bp |
|---|
| Protein Length | 168 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 641616674 |
|---|
| Product | thiol peroxidase |
|---|
| Protein accession | YP_001743852 |
|---|
| Protein GI | 170682639 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG2077] Peroxiredoxin |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.190801 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 54 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCACAAA CCGTTCATTT CCAGGGCAAC CCGGTTACAG TCGCCAATTC CATCCCGCAG
GCGGGTAGCA AAGCGCAGAC TTTTACTCTC GTGGCAAAAG ATCTGTCTGA CGTCACCCTC
GGTCAGTTTG CGGGTAAACG CAAAGTGCTG AACATTTTCC CGAGTATTGA TACCGGTGTT
TGCGCCGCAT CAGTACGTAA GTTTAACCAA CTGGCAACCG AGATCGACAA CACCGTTGTG
CTGTGTATCT CTGCCGATCT GCCGTTCGCC CAGTCTCGTT TCTGCGGCGC AGAAGGTCTG
AACAACGTTA TCACCCTCTC CACTTTCCGT AACGCTGAAT TCCTGCAAGC CTACGGTGTG
GCAATTGCTG ATGGCCCACT GAAAGGTCTG GCAGCGCGTG CCGTTGTGGT TATTGATGAA
AATGACAATG TGATTTTCAG CCAGCTGGTG GATGAAATCA CCACCGAGCC GGATTACGAA
GCAGCTCTGG CTGTACTGAA AGCATAA
|
|---|
| Protein sequence | MSQTVHFQGN PVTVANSIPQ AGSKAQTFTL VAKDLSDVTL GQFAGKRKVL NIFPSIDTGV
CAASVRKFNQ LATEIDNTVV LCISADLPFA QSRFCGAEGL NNVITLSTFR NAEFLQAYGV
AIADGPLKGL AARAVVVIDE NDNVIFSQLV DEITTEPDYE AALAVLKA
|
|---|
| |