| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_1794 |
|---|
| Symbol | |
|---|
| ID | 6145385 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli SMS-3-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010498 |
|---|
| Strand | + |
|---|
| Start bp | 1813402 |
|---|
| End bp | 1814322 |
|---|
| Gene Length | 921 bp |
|---|
| Protein Length | 306 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 641616670 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001743848 |
|---|
| Protein GI | 170681250 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1073] Hydrolases of the alpha/beta superfamily |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 53 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATGAATA ATAAAGTCAG CTTCACTAAC AGCAATAATC CAACCATCTC TTTGTCTGCA
GTGATCTATT TCCCTCCAAA ATTTGATGAA ACCCGTCAGT ATCCGGTAAT TGTGGTATCT
CACCCAGGTG GGGGCGTTAA AGAGCAAACG GCCGGAACCT ATGCCGAAAA ACTGGCGGAA
AAGGGATTTG TCACTATTGC TTATGACGCA TCTTATCAAG GTGAAAGCGG CGGCGAGCCG
CGTCAGTTAG AAAACCCATA CATTCGTACT GAAGACGTCA GTGCCGTGAT TGATTACCTG
ACAACGCTTT CTTATGTCGA CAATACCCGA ATTGGTGCGA TGGGAATTTG TGCCGGAGCA
GGATATACAG CCAATGCTGC AATTCAGGAT CGCCGCATCA AGGCCATCGG TACTGTTAGT
GCGGTCAATA TTGGTTCGAT GTTCCGTAAT GGTTGGGAAA ACAATGTGAA ATCTATTGAT
GCCCTACCAT ACGTTGACGC GGGTTCAGAC GCCCGAACCA GCGATATTAG CAGCGGAGAA
TACGCCACTA TGCCACTGGC ACCAATGAAG GAGTCCGATG CGCCGAACGA AGAACTGCGT
CAGGCCTGGG AGTATTACCA CACCCCTCGC GCGCAGTATC CAACAGCACC GGGTTACGCT
ACTTTGCGCA GCCTTAACCA GATTATTACC TATGATGCTT ACCATATGGC GGAAGTGTAC
CTGACTCAGC CGATACAGAT TGTGGCGGGC AGCCAGGCTG GGAGCAAATG GATGAGTGAC
GACCTGTACG ATCGAGCATC AAGCAAGGAT AAACGCTATC ACATTGTTGA AGGCGCAAAC
CATATGGATC TTTATGACGG CAAAGTCTAT GTGGCTGAAG CAATTTCAGT ATTAGCTCCG
TTCTTTGAGG AAACTCTGTA A
|
|---|
| Protein sequence | MMNNKVSFTN SNNPTISLSA VIYFPPKFDE TRQYPVIVVS HPGGGVKEQT AGTYAEKLAE
KGFVTIAYDA SYQGESGGEP RQLENPYIRT EDVSAVIDYL TTLSYVDNTR IGAMGICAGA
GYTANAAIQD RRIKAIGTVS AVNIGSMFRN GWENNVKSID ALPYVDAGSD ARTSDISSGE
YATMPLAPMK ESDAPNEELR QAWEYYHTPR AQYPTAPGYA TLRSLNQIIT YDAYHMAEVY
LTQPIQIVAG SQAGSKWMSD DLYDRASSKD KRYHIVEGAN HMDLYDGKVY VAEAISVLAP
FFEETL
|
|---|
| |