Gene EcSMS35_1782 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_1782 
Symbol 
ID6145628 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp1799911 
End bp1800474 
Gene Length564 bp 
Protein Length187 aa 
Translation table11 
GC content54% 
IMG OID641616658 
ProductSmr domain-containing protein 
Protein accessionYP_001743836 
Protein GI170680790 
COG category[S] Function unknown 
COG ID[COG2840] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones53 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCTTG ACGACAAATC GCTGTTTCTT GACGCCATGG AAGATGTCCA GCCGCTGAAA 
CGTGCTACAG ATGTCCACTG GCATCCAACG CGTAACCAAC GTGCGCCGCA GCGTATCGAC
ACGCTGCAAC TTGATAATTT CCTCACCACT GGATTTCTCG ACATCATCCC GCTAACTCAG
CCGCTGGAGT TTCGGCGGGA AGGGTTGCAA CATGGGGTGC TGGATAAGCT GCGCAGTGGT
AAATACCCGC AACAGGCGAG CCTGAATCTT TTGCGCCAGC CGGTGGAAGA GTGCCGCAAA
ATGGTGTTCA GTTTCATTCA ACAAGCCCTG GCGGATGGTT TGCGTAATGT GCTGATTATT
CATGGTAAAG GGCGGGAAGA TAAATCGCAT GCCAATATTG TCCGCAGCTA TGTGGCGCGC
TGGTTGACCG AATTTGATGA TGTCCAGGCA TATTGTACCG CGCTACCGCA TCATGGCGGC
AGCGGGGCGT GTTACGTCGC ACTACGTAAA ACGGCACAGG CAAAGCAAGA AAACTGGGAG
CGCCACGCTA AGCGCAGTCG TTGA
 
Protein sequence
MNLDDKSLFL DAMEDVQPLK RATDVHWHPT RNQRAPQRID TLQLDNFLTT GFLDIIPLTQ 
PLEFRREGLQ HGVLDKLRSG KYPQQASLNL LRQPVEECRK MVFSFIQQAL ADGLRNVLII
HGKGREDKSH ANIVRSYVAR WLTEFDDVQA YCTALPHHGG SGACYVALRK TAQAKQENWE
RHAKRSR