Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_1782 |
Symbol | |
ID | 6145628 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010498 |
Strand | - |
Start bp | 1799911 |
End bp | 1800474 |
Gene Length | 564 bp |
Protein Length | 187 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 641616658 |
Product | Smr domain-containing protein |
Protein accession | YP_001743836 |
Protein GI | 170680790 |
COG category | [S] Function unknown |
COG ID | [COG2840] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 53 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACCTTG ACGACAAATC GCTGTTTCTT GACGCCATGG AAGATGTCCA GCCGCTGAAA CGTGCTACAG ATGTCCACTG GCATCCAACG CGTAACCAAC GTGCGCCGCA GCGTATCGAC ACGCTGCAAC TTGATAATTT CCTCACCACT GGATTTCTCG ACATCATCCC GCTAACTCAG CCGCTGGAGT TTCGGCGGGA AGGGTTGCAA CATGGGGTGC TGGATAAGCT GCGCAGTGGT AAATACCCGC AACAGGCGAG CCTGAATCTT TTGCGCCAGC CGGTGGAAGA GTGCCGCAAA ATGGTGTTCA GTTTCATTCA ACAAGCCCTG GCGGATGGTT TGCGTAATGT GCTGATTATT CATGGTAAAG GGCGGGAAGA TAAATCGCAT GCCAATATTG TCCGCAGCTA TGTGGCGCGC TGGTTGACCG AATTTGATGA TGTCCAGGCA TATTGTACCG CGCTACCGCA TCATGGCGGC AGCGGGGCGT GTTACGTCGC ACTACGTAAA ACGGCACAGG CAAAGCAAGA AAACTGGGAG CGCCACGCTA AGCGCAGTCG TTGA
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Protein sequence | MNLDDKSLFL DAMEDVQPLK RATDVHWHPT RNQRAPQRID TLQLDNFLTT GFLDIIPLTQ PLEFRREGLQ HGVLDKLRSG KYPQQASLNL LRQPVEECRK MVFSFIQQAL ADGLRNVLII HGKGREDKSH ANIVRSYVAR WLTEFDDVQA YCTALPHHGG SGACYVALRK TAQAKQENWE RHAKRSR
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