| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_1779 |
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| Symbol | dbpA |
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| ID | 6143287 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | - |
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| Start bp | 1795569 |
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| End bp | 1796942 |
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| Gene Length | 1374 bp |
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| Protein Length | 457 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 641616655 |
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| Product | ATP-dependent RNA helicase DbpA |
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| Protein accession | YP_001743833 |
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| Protein GI | 170681328 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.184016 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 58 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACCGCTT TTTCTACCCT GAATGTTTTG CCTCCCGCCC AACTCACGAA CCTTAATGAG
TTGGGTTATT TAACCATGAC GCCGGTGCAG GCCGCCGCGC TTCCGGCGAT CCTTGCCGGA
AAAGATGTTC GCGTGCAGGC GAAAACCGGC AGTGGCAAAA CGGCGGCTTT TGGCCTCGGC
TTGTTACAGC AAATTGATGC GTCGCTATTT CAAACCCAGG CTTTAGTGCT GTGTCCTACG
CGTGAACTGG CGGATCAGGT GGCAGGTGAA TTGCGTCGGC TGGCGCGTTT TCTGCCAAAT
ACCAAAATTT TGACGTTGTG CGGTGGTCAA CCGTTCGGTA TGCAGCGTGA TTCGTTGCAA
CATGCGCCGC ATATTATCGT GGCAACGCCG GGTCGTTTGC TGGATCACTT GCAAAAAGGC
ACGGTATCAC TGGATGCGCT GAATACTTTG GTGATGGATG AGGCCGACCG CATGCTGGAT
ATGGGATTTA GCGACGCCAT TGATGATGTC ATCCGTTTTG CGCCAGCATC TCGACAGACG
CTTCTGTTTT CGGCAACCTG GCCGGAAGCC ATCGCCGCAA TCAGCGGACG AGTGCAACGC
GATCCTTTAG CGATTGAAAT TGACTCAACA GATGCTCTGC CTCCCATTGA ACAACAATTT
TATGAGACAT TCAGCAAAGG CAAAATTCCG TTGTTGCAAC GGTTATTAAG TTTGCATCAG
CCATCCTCTT GCGTGGTGTT TTGCAATACC AAAAAAGATT GCCAGGCTGT CTGTGACGCG
CTGAATGAAG TAGGGCAAAG TGCATTGTCG TTACACGGCG ATCTGGAGCA ACGCGATCGC
GATCAGACTC TGGTACGTTT TGCTAACGGT AGCGCCCGTG TACTGGTCGC GACTGATGTT
GCTGCGCGTG GTCTGGATAT TAAATCGCTT GAGCTGGTAG TGAACTTTGA ACTGGCGTGG
GACCCTGAAG TTCATGTACA TCGCATCGGT CGTACAGCGC GTGCAGGAAA TAGCGGTCTG
GCGATCAGTT TCTGTGCCCC GGAAGAAGCA CAGCGGGCCA ATATCATTTC TGACATGTTG
CAGATAAAAC TTAACTGGCA AACGCCGCCA GCTAATAGTT CCATTGTGCC GCTGGAAGCC
GAAATGGCAA CGTTATGTAT CGATGGCGGG AAAAAAGCCA AAATGCGCCC GGGTGATGTA
TTAGGTGCGC TGACAGGAGA TATCGGGCTT GATGGCGCAG ATATTGGCAA AATCGCCGTG
CATCCGGCGC ATGTCTATGT CGCGGTGCGT CAGGCTGTTG CTCATAAAGC ATGGAAACAG
TTACAGGGCG GGAAGATTAA AGGAAAAACG TGCCGGGTGC GGTTATTAAA ATAA
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| Protein sequence | MTAFSTLNVL PPAQLTNLNE LGYLTMTPVQ AAALPAILAG KDVRVQAKTG SGKTAAFGLG
LLQQIDASLF QTQALVLCPT RELADQVAGE LRRLARFLPN TKILTLCGGQ PFGMQRDSLQ
HAPHIIVATP GRLLDHLQKG TVSLDALNTL VMDEADRMLD MGFSDAIDDV IRFAPASRQT
LLFSATWPEA IAAISGRVQR DPLAIEIDST DALPPIEQQF YETFSKGKIP LLQRLLSLHQ
PSSCVVFCNT KKDCQAVCDA LNEVGQSALS LHGDLEQRDR DQTLVRFANG SARVLVATDV
AARGLDIKSL ELVVNFELAW DPEVHVHRIG RTARAGNSGL AISFCAPEEA QRANIISDML
QIKLNWQTPP ANSSIVPLEA EMATLCIDGG KKAKMRPGDV LGALTGDIGL DGADIGKIAV
HPAHVYVAVR QAVAHKAWKQ LQGGKIKGKT CRVRLLK
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