Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_1778 |
Symbol | |
ID | 6146500 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010498 |
Strand | + |
Start bp | 1794505 |
End bp | 1795440 |
Gene Length | 936 bp |
Protein Length | 311 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 641616654 |
Product | C32 tRNA thiolase |
Protein accession | YP_001743832 |
Protein GI | 170683989 |
COG category | [D] Cell cycle control, cell division, chromosome partitioning |
COG ID | [COG0037] Predicted ATPase of the PP-loop superfamily implicated in cell cycle control |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.446502 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 61 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCGCAAA ATCAAGAAAT TAGTAAGAAA GAACAATACA ATCTGAACAA ATTACAAAAA CGTCTGCGTC GTAACGTGGG CGAAGCCATT GCTGACTTCA ATATGATTGA AGAAGGCGAT CGCATCATGG TTTGCCTCTC CGGGGGTAAA GACAGCTATA CCATGCTGGA AATTCTGCGC AATTTGCAGC AAAGCGCGCC AATCAATTTT TCGCTGGTGG CTGTTAACCT CGATCAAAAA CAACCGGGCT TTCCGGAACA CGTTCTGCCC GAGTATCTTG AAACGCTGGG CGTTGAGTAC AAGATTGTGG AAGAGAACAC TTACGGTATC GTGAAAGAGA AGATTCCGGA GGGCAAAACC ACTTGCTCAC TGTGTTCTCG TCTTCGTCGC GGTATCCTTT ATCGCACCGC AACGGAACTG GGGGCGACGA AGATCGCGTT GGGTCACCAT CGTGACGATA TCCTGCAAAC GCTGTTCTTA AATATGTTCT ACGGCGGCAA GATGAAAGGT ATGCCTCCGA AACTGATGAG CGATGATGGC AAACATATCG TGATTCGCCC GCTGGCCTAC TGCCGCGAGA AAGATATTCA GCGCTTTGCC GATGCAAAAG CGTTCCCGAT TATTCCGTGC AACCTGTGCG GTTCACAGCC TAACCTGCAA CGTCAGGTGA TTGCTGACAT GTTGCGTGAC TGGGATAAAC GTTATCCGGG GCGTATCGAG ACGATGTTCA GCGCGATGCA GAATGTGGTG CCATCGCATC TGTGCGATAC CAACCTGTTC GATTTCAAAG GCATTACCCA CGGTTCTGAA GTGGTTAACG GGGGTGATCT GGCGTTTGAT CGCGAAGAGA TCCCTCTACA ACCGGCGGGT TGGCAGCCTG AAGAAGATGA AAATCAGTTG GATGAGTTAC GACTGAATGT GGTTGAAGTG AAATAA
|
Protein sequence | MSQNQEISKK EQYNLNKLQK RLRRNVGEAI ADFNMIEEGD RIMVCLSGGK DSYTMLEILR NLQQSAPINF SLVAVNLDQK QPGFPEHVLP EYLETLGVEY KIVEENTYGI VKEKIPEGKT TCSLCSRLRR GILYRTATEL GATKIALGHH RDDILQTLFL NMFYGGKMKG MPPKLMSDDG KHIVIRPLAY CREKDIQRFA DAKAFPIIPC NLCGSQPNLQ RQVIADMLRD WDKRYPGRIE TMFSAMQNVV PSHLCDTNLF DFKGITHGSE VVNGGDLAFD REEIPLQPAG WQPEEDENQL DELRLNVVEV K
|
| |