Gene EcSMS35_1775 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_1775 
SymbolydbK 
ID6144308 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp1788746 
End bp1792270 
Gene Length3525 bp 
Protein Length1174 aa 
Translation table11 
GC content54% 
IMG OID641616651 
Productpyruvate-flavodoxin oxidoreductase 
Protein accessionYP_001743829 
Protein GI170683269 
COG category[C] Energy production and conversion 
COG ID[COG0674] Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit
[COG1013] Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit
[COG1014] Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, gamma subunit 
TIGRFAM ID[TIGR02176] pyruvate:ferredoxin (flavodoxin) oxidoreductase, homodimeric 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones52 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTACTA TTGACGGTAA TGGCGCGGTT GCTTCGGTGG CGTTTCGCAC CAGTGAAGTT 
ATCGCCATCT ACCCTATTAC CCCCAGTTCC ACGATGGCAG AACAGGCTGA TGCCTGGGCC
GGAAACGGCT TGAAGAACGT TTGGGGAGAC ACACCACGCG TGGTTGAAAT GCAGTCGGAA
GCGGGTGCTA TCGCTACCGT GCATGGCGCT TTGCAGACGG GTGCCCTTTC AACATCGTTT
ACGTCATCGC AGGGTTTGCT GCTGATGATC CCGACGCTGT ACAAACTGGC AGGCGAACTC
ACACCGTTTG TCCTGCATGT AGCGGCACGT ACCGTTGCCA CACATGCACT CTCTATTTTT
GGCGATCATT CCGACGTTAT GGCGGTGCGC CAGACGGGTT GCGCGATGTT GTGTGCGGCT
AACGTCCAGG AAGCGCAAGA CTTTGCTCTC ATTTCGCACA TCGCAACGCT GAAGAGCCGC
GTGCCATTTA TTCATTTCTT TGATGGTTTC CGCACGTCCC ACGAAATCAA TAAAATTGTC
CCGCTGGCCG ATGACACTAT TCTTGATCTC ATGCCGCAGG CCGAAATTGA TGCTCATCGC
GCCCGGGCGC TCAACCCGGA ACATCCGGTG ATCCGCGGTA CGTCCGCCAA TCCTGACACT
TATTTCCAGT CTCGCGAAGC CACCAACCCC TGGTACAACG CGGTCTATGA CCATGTTGAA
CAGGCGATGA ATGATTTCGC TGCCGCGACA GGTCGTCAGT ATCAGCCATT TGAGTATTAT
GGGCATCCGC AAGCGGAACG GGTGATTATC CTGATGGGCT CAGCCATTGG CACCTGTGAA
GAAGTGGTTG ATGAATTGCT AACCCGTGGC GAAAAAGTCG GCGTGCTGAA AGTTCGCCTG
TACCGTCCCT TCTCCGCCAA ACACTTGCTA CAAGCTCTGC CGGGATCCGT ACGCAGCGTG
GCGGTACTGG ACAGAACCAA AGAACCCGGT GCCCAGGCAG AACCGCTCTA TCTGGATGTG
ATGACCGCAC TGGCAGAAGC CTTTAATAAT GGCGAGCGCG AAACCCTGCC CCGTGTCATT
GGTGGGCGCT ATGGTCTTTC ATCCAAAGAA TTTGGCCCGG ACTGTGTACT GGCGGTATTT
GCCGAGCTCA ACGCGGCTAA ACCGAAAGCG CGCTTTACGG TTGGTATTTA CGATGATGTG
ACCAATCTGT CACTGCCGTT GCCGGAAAAC ACCCTGCCAA ACTCGGCGAA ACTTGAAGCC
TTGTTTTATG GCCTTGGTAG TGATGGCAGC GTTTCCGCGA CCAAAAACAA TATCAAGATT
ATCGGTAATT CCACGCCGTG GTACGCACAG GGCTATTTTG TTTACGACTC CAAAAAGGCG
GGCGGCCTGA CGGTTTCTCA CCTTCGCGTG AGCGAGCAGC CGATTCGTTC CGCTTATCTG
ATTTCCCAGG CTGATTTTGT TGGCTGCCAC CAGTTGCAGT TTATCGACAA ATATCAGATG
GTTGAGCGTT TAAAACCTGG CGGCATTTTC CTGCTCAACA CGCCGTACAG CGCAGATGAA
GTGTGGTCGC GCTTGCCGCA GGAAGTTCAG GCCGTGTTAA ACCAGAAAAA AGCGCGCTTC
TATGTGATTA ACGCGGCGAA AATCGCCCGC GAATGTGGCC TGGCGGCCCG AATTAATACC
GTCATGCAGA TGGCTTTTTT CCATCTGACG CAAATTCTGC CTGGCGATAG CGCCCTCGCA
GAATTGCAGG GTGCGATTGC CAAAAGTTAC AGTAGCAAAG GTCAGGATCT GGTGGAGCGC
AACTGGCAGG CTCTGGCGCT GGCACGTGAA TCCGTAGAAG AAGTTCCGCT GCAACCAGTA
AATCCGCACA GCGCCAATCG ACCGCCAGTG GTTTCCGATG CCGCCCCTGA TTTCGTGAAA
ACCGTAACCG CGGCGATGCT CGCCGGGCTT GGTGATGCCC TCCCCGTTTC GGCGCTGCCG
CCAGACGGCA CCTGGCCGAT GGGCACCACG CGCTGGGAAA AACGCAATAT CGCCGAAGAG
ATCCCCATCT GGAAAGAGGA ACTCTGTACC CAATGTAACC ACTGCGTCGC TGCTTGCCCA
CACTCAGCTA TTCGCGCAAA AGTGGTACCG CCTGAAGCGA TGGAAAACGC CCCTGCCAGC
CTGCATTCGC TGGATGTGAA ATCGCGTGAT ATGCGCGGGC AGAAATATGT CTTGCAGGTG
GCTCCGGAAG ATTGCACCGG TTGTAACCTG TGCGTCGAAG TTTGCCCGGC GAAAGACCGT
CAGAATCCAG AGATTAAAGC CATCAATATG ATGTCGCGGC TGGAACATGT CGAAGAAGAG
AAAATCAATT ACGATTTCTT CCTCAACCTG CCAGAAATCG ACCGTAGCAA ACTGGAACGT
ATTGATATTC GTACATCACA GCTGATTACA CCGCTGTTTG AATATTCCGG TGCTTGCTCC
GGTTGTGGCG AGACGCCGTA TATTAAATTG CTGACTCAGC TCTATGGCGA TCGGATGTTG
ATCGCTAACG CTACGGGTTG TTCTTCAATT TATGGTGGTA ACCTGCCCTC CACACCATAT
ACCACTGATG CCAACGGTCG TGGACCGGCA TGGGCGAACT CGCTGTTTGA AGATAACGCC
GAATTCGGCC TTGGTTTCCG CCTTACGGTC GATCAACACC GTGTCCGCGT GCTGCGTCTG
CTGGATCAAT TTGCCGATAA AATCCCGGCG GAATTACTGA CTGCGTTGAA ATCAGACGCT
ACGCCAGAGA TTCGTCGTGA ACAGGTTGCA GCTTTACGCC AGCAACTCAA CGATGTTGCC
GAAGCACATG AACTGCTGCG TGACGCAGAT GCTCTGGTGG AAAAATCAAT CTGGCTGATT
GGTGGCGATG GCTGGGCTTA CGATATTGGC TTTGGCGGTC TGGATCATGT ATTGAGCCTG
ACGGAAAACG TCAACATTCT GGTGCTGGAT ACGCAATGCT ATTCCAACAC TGGTGGTCAG
GCGTCGAAAG CGACACCGCT GGGTGCAGTA ACTAAGTTCG GCGAGCACGG CAAACGTAAA
GCGCGTAAAG ATCTTGGCGT CAGTATGATG ATGTACGGTC ATGTTTATGT GGCGCAGATT
TCTCTCGGCG CGCAGCTGAA CCAGACGGTG AAAGCGATTC AGGAAGCGGA AGCGTATCCG
GGACCATCGC TGATCATTGC TTATAGCCCG TGTGAAGAGC ATGGTTACGA TCTGGCTCTC
AGCCACGACC AGATGCGCCA ACTCACTGCT ACCGGCTTCT GGCCGCTATA TCGCTTTGAT
CCACGTCGAG CCGATGAAGG CAAACTGCCG CTGGCACTGG ATTCACGCCC GCCGTCAGAA
GCACTGGAAG AAACGTTACT TCATGAGCAA CGTTTCCGTC GTCTGAATTC GCAGCAGCCA
GAAGTGGCAG AACAGTTATG GAAAGATGCT GCAGCTGATT TGCAAAAACG CTATGACTTC
CTGGCACAAA TGGCCGGAAA AGCGGAAAAA AGCAACACCG ATTAA
 
Protein sequence
MITIDGNGAV ASVAFRTSEV IAIYPITPSS TMAEQADAWA GNGLKNVWGD TPRVVEMQSE 
AGAIATVHGA LQTGALSTSF TSSQGLLLMI PTLYKLAGEL TPFVLHVAAR TVATHALSIF
GDHSDVMAVR QTGCAMLCAA NVQEAQDFAL ISHIATLKSR VPFIHFFDGF RTSHEINKIV
PLADDTILDL MPQAEIDAHR ARALNPEHPV IRGTSANPDT YFQSREATNP WYNAVYDHVE
QAMNDFAAAT GRQYQPFEYY GHPQAERVII LMGSAIGTCE EVVDELLTRG EKVGVLKVRL
YRPFSAKHLL QALPGSVRSV AVLDRTKEPG AQAEPLYLDV MTALAEAFNN GERETLPRVI
GGRYGLSSKE FGPDCVLAVF AELNAAKPKA RFTVGIYDDV TNLSLPLPEN TLPNSAKLEA
LFYGLGSDGS VSATKNNIKI IGNSTPWYAQ GYFVYDSKKA GGLTVSHLRV SEQPIRSAYL
ISQADFVGCH QLQFIDKYQM VERLKPGGIF LLNTPYSADE VWSRLPQEVQ AVLNQKKARF
YVINAAKIAR ECGLAARINT VMQMAFFHLT QILPGDSALA ELQGAIAKSY SSKGQDLVER
NWQALALARE SVEEVPLQPV NPHSANRPPV VSDAAPDFVK TVTAAMLAGL GDALPVSALP
PDGTWPMGTT RWEKRNIAEE IPIWKEELCT QCNHCVAACP HSAIRAKVVP PEAMENAPAS
LHSLDVKSRD MRGQKYVLQV APEDCTGCNL CVEVCPAKDR QNPEIKAINM MSRLEHVEEE
KINYDFFLNL PEIDRSKLER IDIRTSQLIT PLFEYSGACS GCGETPYIKL LTQLYGDRML
IANATGCSSI YGGNLPSTPY TTDANGRGPA WANSLFEDNA EFGLGFRLTV DQHRVRVLRL
LDQFADKIPA ELLTALKSDA TPEIRREQVA ALRQQLNDVA EAHELLRDAD ALVEKSIWLI
GGDGWAYDIG FGGLDHVLSL TENVNILVLD TQCYSNTGGQ ASKATPLGAV TKFGEHGKRK
ARKDLGVSMM MYGHVYVAQI SLGAQLNQTV KAIQEAEAYP GPSLIIAYSP CEEHGYDLAL
SHDQMRQLTA TGFWPLYRFD PRRADEGKLP LALDSRPPSE ALEETLLHEQ RFRRLNSQQP
EVAEQLWKDA AADLQKRYDF LAQMAGKAEK SNTD