Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_1771 |
Symbol | idhA |
ID | 6145272 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010498 |
Strand | + |
Start bp | 1786687 |
End bp | 1787676 |
Gene Length | 990 bp |
Protein Length | 329 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 641616647 |
Product | D-lactate dehydrogenase |
Protein accession | YP_001743825 |
Protein GI | 170680565 |
COG category | [C] Energy production and conversion [H] Coenzyme transport and metabolism [R] General function prediction only |
COG ID | [COG1052] Lactate dehydrogenase and related dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 49 |
Fosmid unclonability p-value | 0.914114 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACTCG CCGTTTATAG CACAAAACAG TACGACAAGA AGTACCTGCA ACAGGTGAAC GAGTCCTTTG GCTTTGAGCT GGAATTTTTT GACTTTCTGC TGACGGAAAA AACCGCTAAA ACTGCCAATG GCTGCGAAGC GGTATGTATT TTCGTAAACG ATGACGGCAG CCGCCCGGTG CTGGAAGAGC TGAAAAAGCA CGGCGTTAAA TATATCGCCC TGCGCTGTGC CGGTTTCAAT AACGTCGACC TTGACGCGGC AAAAGAACTG GGGCTGAAAG TAGTCCGTGT TCCAGCCTAT GATCCAGAAG CCGTTGCTGA ACATGCCATC GGTATGATGA TGACGCTGAA CCGCCGTATT CACCGCGCGT ATCAGCGTAC CCGTGACGCC AACTTCTCTC TGGAAGGTCT GACCGGCTTT ACTATGTATG GCAAAACGGC AGGCGTTATC GGTACTGGTA AAATCGGTGT GGCGATGCTG CGCATTCTGA AAGGTTTTGG TATGCGTCTG CTGGCGTTCG ATCCGTATCC AAGTGCGGCG GCGCTGGAAC TCGGTGTGGA GTATGTCGAT CTGCCAACCC TGTTCTCTGA ATCAGACGTT ATCTCTCTGC ACTGCCCGCT GACACCGGAA AACTATCATC TGTTGAACGA AGCCGCCTTC GATCAGATGA AAAATGGCGT GATGATCGTC AATACCAGTC GCGGTGCATT GATTGATTCT CAGGCAGCAA TTGAAGCGCT GAAAAATCAG AAAATTGGTT CGTTGGGTAT GGACGTGTAT GAGAACGAAC GCGATCTGTT CTTTGAAGAC AAATCCAACG ACGTGATCCA GGATGACGTA TTCCGTCGTC TGTCTGCCTG CCACAACGTG CTGTTTACCG GGCACCAGGC ATTCCTGACA GCAGAAGCAC TGACCAGTAT TTCTCAGACT ACGCTGCAAA ACTTAAGCAA TCTGGAAAAA GGCGAAACCT GCCCGAACGA ACTGGTTTAA
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Protein sequence | MKLAVYSTKQ YDKKYLQQVN ESFGFELEFF DFLLTEKTAK TANGCEAVCI FVNDDGSRPV LEELKKHGVK YIALRCAGFN NVDLDAAKEL GLKVVRVPAY DPEAVAEHAI GMMMTLNRRI HRAYQRTRDA NFSLEGLTGF TMYGKTAGVI GTGKIGVAML RILKGFGMRL LAFDPYPSAA ALELGVEYVD LPTLFSESDV ISLHCPLTPE NYHLLNEAAF DQMKNGVMIV NTSRGALIDS QAAIEALKNQ KIGSLGMDVY ENERDLFFED KSNDVIQDDV FRRLSACHNV LFTGHQAFLT AEALTSISQT TLQNLSNLEK GETCPNELV
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