Gene EcSMS35_1758 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_1758 
Symbol 
ID6144937 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp1762892 
End bp1763692 
Gene Length801 bp 
Protein Length266 aa 
Translation table11 
GC content51% 
IMG OID641616634 
Producthypothetical protein 
Protein accessionYP_001743812 
Protein GI170681330 
COG category[S] Function unknown 
COG ID[COG1434] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.000000000726781 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAACATTA CCCCGTTTCC GACGCTTTCG CCGGCAACCA TAGATGCCAT AAATGTTATC 
GGTCAGTGGC TGGCGCAGGA TGATTTCTCC GGTGAGGTGC CGTATCAGGC CGATTGCGTG
ATCCTTGCAG GCAATGCGGT TATGCCGACT ATCGATGCGG CATGTAAGAT TGCCCGCGAT
CAGCAAATTC CTTTACTGAT TAGTGGTGGT ATCGGTCACT CGACAACTTT TTTGTATAGC
GCCATCGCAC AGCATCCGCA CTACAACACT ATCCGCACCA CTGGCAGAGC TGAAGCTACC
ATCCTGGCGG ATATCGCTCA TCAGTTCTGG CACATTCCGC ATGAAAAAAT CTGGATTGAA
GACCAGTCAA CAAACTGCGG TGAAAACGCA CGCTTTAGCA TCGCGCTATT GAATCAGGCC
GTAGAACGAG TTCACACAGC TATCGTTGTT CAGGACCCCA CCATGCAGCG GCGCACGATG
GCGACGTTCC GCCGTATGAC CGGGGACAAT CCCGATGCAC CACGCTGGTT AAGTTATCCC
GGATTCGTTC CTCAGTTAGG AAATAACGCA GACAGTGTAA TCTTTATTAA TCAGTTACAA
GGATTATGGC CGGTTGAGCG TTATCTATCA CTACTCACTG GCGAGCTGCC GCGTTTACAC
GATGATAGCG ATGGCTACGG TCCCCGCGGG CGAGATTTTA TCGTTCACGT TGATTTTCCG
GCAGAAGTCA TCCAGGCATG GCAAACGCTG AAACACGATG CGGTGCTCAT CGAGGCGATG
GAAAGTCGCT CGTTACGTTA A
 
Protein sequence
MNITPFPTLS PATIDAINVI GQWLAQDDFS GEVPYQADCV ILAGNAVMPT IDAACKIARD 
QQIPLLISGG IGHSTTFLYS AIAQHPHYNT IRTTGRAEAT ILADIAHQFW HIPHEKIWIE
DQSTNCGENA RFSIALLNQA VERVHTAIVV QDPTMQRRTM ATFRRMTGDN PDAPRWLSYP
GFVPQLGNNA DSVIFINQLQ GLWPVERYLS LLTGELPRLH DDSDGYGPRG RDFIVHVDFP
AEVIQAWQTL KHDAVLIEAM ESRSLR