| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_1731 |
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| Symbol | ydcV |
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| ID | 6145700 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | - |
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| Start bp | 1735680 |
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| End bp | 1736474 |
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| Gene Length | 795 bp |
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| Protein Length | 264 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 641616607 |
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| Product | ABC transporter, permease protein |
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| Protein accession | YP_001743785 |
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| Protein GI | 170682582 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1177] ABC-type spermidine/putrescine transport system, permease component II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.0000000945918 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCACTCTG AACGCGCACC GTTTTTCCTT AAACTGGCGG CCTGGGGCGG CGTGGTTTTC
CTACATTTTC CCATCCTGAT TATCGCCGCT TATGCGTTTA ACACTGAAGA TGCGGCGTTT
AGTTTTCCAC CGCAAGGCCT GACGTTGCGC TGGTTTAGCG TGGCAGCACA GCGTAGTGAC
ATTCTTGATG CCGTGACACT GTCACTTAAG GTGGCGACGC TGGCGACATT AATCGCGCTG
GTGTTAGGGA CGCTGGCTGC TGCCGCACTA TGGCGACGAG ACTTTTTCGG TAAAAACGCC
ATTTCGTTGT TACTGCTGCT GCCCATTGCG CTGCCGGGCA TTGTCACTGG TCTGGCGCTA
TTAACCGCTT TTAAAACCAT CAATCTGGAT CCGGGATTTT TCACCATCGT GGTCGGTCAT
GCGACTTTTT GCGTAGTGGT GGTGTTTAAC AATGTCATCG CCCGTTTTCG CCGCACCTCG
TGGAGTCTGG TTGAGGCGTC AATGGATCTT GGGGCTAATG GGTGGCAAAC CTTCCGCTAC
GTAGTGTTGC CGAATCTCAG TTCGGCGCTA CTGGCAGGAG GAATGCTGGC ATTTGCCTTG
TCGTTCGATG AAATCATCGT GACGACCTTT ACGGCAGGTC ATGAACGAAC GTTACCGTTG
TGGTTGCTCA ATCAGCTTGG GCGACCGCGT GATGTACCGG TAACCAACGT GGTGGCACTG
CTGGTTATGT TGGTAACAAC CTTGCCGATC CTGGGGGCCT GGTGGCTAAC CCGCGAAGGC
GACAATGGTC AATAA
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| Protein sequence | MHSERAPFFL KLAAWGGVVF LHFPILIIAA YAFNTEDAAF SFPPQGLTLR WFSVAAQRSD
ILDAVTLSLK VATLATLIAL VLGTLAAAAL WRRDFFGKNA ISLLLLLPIA LPGIVTGLAL
LTAFKTINLD PGFFTIVVGH ATFCVVVVFN NVIARFRRTS WSLVEASMDL GANGWQTFRY
VVLPNLSSAL LAGGMLAFAL SFDEIIVTTF TAGHERTLPL WLLNQLGRPR DVPVTNVVAL
LVMLVTTLPI LGAWWLTREG DNGQ
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