Gene EcSMS35_1719 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_1719 
Symbol 
ID6145277 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp1726867 
End bp1727928 
Gene Length1062 bp 
Protein Length353 aa 
Translation table11 
GC content49% 
IMG OID641616595 
Producthypothetical protein 
Protein accessionYP_001743773 
Protein GI170680680 
COG category[S] Function unknown 
COG ID[COG3391] Uncharacterized conserved protein 
TIGRFAM ID[TIGR02276] 40-residue YVTN family beta-propeller repeat 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.0023319 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCATTTAC GTCATCTGTT TTCATCGCGC CTGCGTGGTT CATTACTGTT AGGTTCATTG 
CTTGTTGCTT CATCATTCAG TACGCAGGCC GCAGAAGAAA TGCTGCGTAA AGCGGTAGGT
AAAGGTGCCT ACGAAATGGC TTATAGCCAG CAAGAAAACG CGCTGTGGCT CGCCACTTCG
CAAAGCCGCA AACTGGATAA AGGCGGCGTG GTTTATCGTC TTGATCCGGT TACTCTGGAA
GTGACGCAGG CGATCCATAA CGATCTCAAG CCGTTTGGTG CCACCATCAA TAACACGACT
CAGACGTTGT GGTTTGGTAA CACTGTAAAC AGCGCGGTCA CGGCGATAGA TGCCAAAACG
GGCGAAGTGA AAGGACGTCT GGTGCTTGAT GAGCGTAAAC GTACCGAAGA AGTGCGTCCG
TTGCAGCCGC GTGAGCTGGT AGCTGATGAT GCCACGAACA CCGTTTACAT CAGTGGTATT
GGTAAAGAGA GCGTGATTTG GGTCGTTGAT GGCGAGAATA TCAAACTGAA AACCGCCATC
CAGAACACCG GTAAAATGAG TACCGGTTTA GCGCTGGATA GCAAAGGCAA ACGTCTTTAC
ACCACTAACG CTGACGGCGA ATTGATTACC ATCGACACCG CCGACAATAA AATCCTCAGC
CGTAAAAAGC TGCTGGATGA CGACAAAGAG CACTTCTTTA TCAACATCAG CCTTGATACC
ACCAATCAGC GTGCATTTAT CACCGATTCT AAAGCGGCAG AAGTGTTAGT GGTTGATACC
CGTAATGGCA ATATTCTTGC GAAGGTTGCG GCACCGGAAT CACTGGCTGT GCTGTTTAAC
CCAGCGCGTA ATGAAGCCTA CGTGACGCAT CGTCAGGCAG GTAAAGTCAG TGTGATTGAC
GCGAAAAGCT ATAAAGTGGT GAAAACGTTC GATACGCCGA CTCATCCGAA CAGCCTGGCG
CTGTCTGCAG ATGGCAAAAC GCTGTATGTC AGTGTGAAAC AAAAATCCAC TAAACAGCAG
GAAGCTACCC AGCCGGACGA TGTGATTCGT ATTGCGCTGT AA
 
Protein sequence
MHLRHLFSSR LRGSLLLGSL LVASSFSTQA AEEMLRKAVG KGAYEMAYSQ QENALWLATS 
QSRKLDKGGV VYRLDPVTLE VTQAIHNDLK PFGATINNTT QTLWFGNTVN SAVTAIDAKT
GEVKGRLVLD ERKRTEEVRP LQPRELVADD ATNTVYISGI GKESVIWVVD GENIKLKTAI
QNTGKMSTGL ALDSKGKRLY TTNADGELIT IDTADNKILS RKKLLDDDKE HFFINISLDT
TNQRAFITDS KAAEVLVVDT RNGNILAKVA APESLAVLFN PARNEAYVTH RQAGKVSVID
AKSYKVVKTF DTPTHPNSLA LSADGKTLYV SVKQKSTKQQ EATQPDDVIR IAL