| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_1716 |
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| Symbol | |
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| ID | 6143472 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | + |
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| Start bp | 1723321 |
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| End bp | 1724370 |
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| Gene Length | 1050 bp |
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| Protein Length | 349 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 641616592 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_001743770 |
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| Protein GI | 170679992 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.00839353 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGTTATTC GCGGCATGAC GATTAGTTTG CCATGGTTTG CTTTTATCAA TGTCAGTTTT
GCATTGATAA TTTTGCTGCG CCGTGTTCTG TTTAATGACC TTACTCCACC CTGGTTAAAT
GAAAAAAGCC TTATACATTC TATTGATATA TCTGCAACGG GTATTCTGCT GATTTGCAGT
GGTTTACTAC TCATCCCTCG GCAAAAAACA TTACCTATCC AGGTGCTATT AGTTGCCCTG
AGCCTGCTAT GGTCATGGTG TAGTTATCAC TTTATTGCGT ACTGGACGCT GCAGTTTGCT
TATCCACTAT GTGTATTATT AATGCTTAGT GGCGTTATCG CACTTTATTT CCATACCCCA
TCATTGCTCG CATTTGTCAT TCCCTTATGG TTCACCACTC CAATAGCGAG TCTTATGCTT
AATCAACAGA TCAATATTCA TTTTGCTGTT GTATGGTGTA TTTTTTCACT GGCGCTATAT
GGTGGGCGAC TCATTTTGTT ACGTTGGTTT GAAGAAGCAT GGGTACAAAA CAGTTATAAC
AACCAGTTAA TTAATCGCCT TGATGCATTA GCACATCGTG ATCCTTTAAC TGGGATAGCA
AACCGACGTG CAATGAACAG TATCTTACAC GACGCGATAG ATAACGGCGG GTCATTTGCT
CTTATTATGC TGGATGTCGA TTTTTTTAAA CGTTACAACG ACACTTACGG GCATCCTGCT
GGGGATCGTT GTCTAATACA AGTTGCCGAC GCTCTACAGC GTTCAACTCG CCAGTCGGAG
GATGTTGTTG TCCGTTATGG TGGCGAAGAG TTTGTCATCA TACTTTTTAA TGCAACATTG
CCGGAAGCAG AGACGGTAGC AGCCAGAGTG AAGCAAGAAC TTAAACTGGC AGCTATCCCG
CATCAGGCAT CTGCTGTTAA TGCATTCGTT ACGGTTAGTC AGGGGATTAC CTGTTCTGCT
CCCGCAAAAA CGGCTGAACA AATTATTTCA GATGCCGACG CTGCGTTATA CCGGGCGAAA
GAAAGTGGGC GAAATCGATG GGAAAAATAA
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| Protein sequence | MVIRGMTISL PWFAFINVSF ALIILLRRVL FNDLTPPWLN EKSLIHSIDI SATGILLICS
GLLLIPRQKT LPIQVLLVAL SLLWSWCSYH FIAYWTLQFA YPLCVLLMLS GVIALYFHTP
SLLAFVIPLW FTTPIASLML NQQINIHFAV VWCIFSLALY GGRLILLRWF EEAWVQNSYN
NQLINRLDAL AHRDPLTGIA NRRAMNSILH DAIDNGGSFA LIMLDVDFFK RYNDTYGHPA
GDRCLIQVAD ALQRSTRQSE DVVVRYGGEE FVIILFNATL PEAETVAARV KQELKLAAIP
HQASAVNAFV TVSQGITCSA PAKTAEQIIS DADAALYRAK ESGRNRWEK
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