Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_1699 |
Symbol | fdnH |
ID | 6146454 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010498 |
Strand | - |
Start bp | 1700447 |
End bp | 1701331 |
Gene Length | 885 bp |
Protein Length | 294 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 641616575 |
Product | formate dehydrogenase, nitrate-inducible, iron-sulfur subunit |
Protein accession | YP_001743753 |
Protein GI | 170681880 |
COG category | [C] Energy production and conversion |
COG ID | [COG0437] Fe-S-cluster-containing hydrogenase components 1 |
TIGRFAM ID | [TIGR01582] formate dehydrogenase, beta subunit, Fe-S containing |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.808171 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 62 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTATGG AAACGCAGGA CATTATCAAA AGGTCCGCAA CTAACTCCAT CACGCCGCCT TCTCAGGTGC GTGATTACAA AGCAGAAGTC GCGAAACTTA TCGACGTTTC CACCTGTATC GGTTGTAAAG CCTGTCAGGT GGCGTGTTCG GAGTGGAACG ACATCCGTGA TGAAGTGGGG CACTGCGTCG GGGTTTACGA TAACCCCGCC GATCTGAGCG CCAAGTCCTG GACTGTGATG CGCTTTAGCG AAACCGAACA GAACGGCAAG CTGGAGTGGC TGATCCGTAA AGACGGCTGT ATGCACTGTG AAGATCCGGG CTGCCTGAAG GCGTGCCCGT CTGCTGGTGC AATCATTCAG TACGCTAACG GGATTGTCGA TTTCCAGTCG GAAAACTGCA TCGGCTGTGG TTACTGCATT GCCGGGTGTC CGTTTAATAT TCCGCGCCTC AACAAAGAGG ATAACCGGGT ATATAAATGC ACGCTCTGCG TCGATCGCGT CAGCGTCGGC CAGGAACCGG CTTGTGTGAA AACCTGTCCG ACCGGGGCTA TCCACTTCGG CACCAAGAAG GAGATGCTGG AGCTGGCGGA ACAGCGCGTG GCGAAACTGA AAGCGCGTGG TTACGAACAT GCTGGCGTCT ACAACCCGGA AGGGGTCGGT GGTACGCACG TCATGTACGT GTTGCATCAC GCCGATCAGC CGGAGCTGTA TCACGGTCTG CCGAAAGATC CGAAGATCGA CACATCGGTG AACTTGTGGA AAGGCGCGTT GAAACCGCTG GCAGCGGCTG GCTTTATCGC CACTTTTGCC GGGTTGATTT TCCACTACAT CGGTATTGGC CCGAATAAGG AAGTGGACGA TGACGAGGAG GAGCATCATG AGTAA
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Protein sequence | MAMETQDIIK RSATNSITPP SQVRDYKAEV AKLIDVSTCI GCKACQVACS EWNDIRDEVG HCVGVYDNPA DLSAKSWTVM RFSETEQNGK LEWLIRKDGC MHCEDPGCLK ACPSAGAIIQ YANGIVDFQS ENCIGCGYCI AGCPFNIPRL NKEDNRVYKC TLCVDRVSVG QEPACVKTCP TGAIHFGTKK EMLELAEQRV AKLKARGYEH AGVYNPEGVG GTHVMYVLHH ADQPELYHGL PKDPKIDTSV NLWKGALKPL AAAGFIATFA GLIFHYIGIG PNKEVDDDEE EHHE
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