| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_1685 |
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| Symbol | ddpX |
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| ID | 6142732 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | + |
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| Start bp | 1689073 |
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| End bp | 1689654 |
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| Gene Length | 582 bp |
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| Protein Length | 193 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 641616561 |
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| Product | D-alanyl-D-alanine dipeptidase |
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| Protein accession | YP_001743739 |
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| Protein GI | 170680875 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2173] D-alanyl-D-alanine dipeptidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 59 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCGGATA CCACCGAACT GGTTGATTTA GCCGTGACCT TCCCTGATCT GGAGATCGAA
CTGAAATACG CCTGCGCTGA TAACATCACA GGTAAAGCTA TTTATCAGCA AGCGCGTTGT
CTGTTACACA AGGATGCGAT TACCGCGCTG GCGAAAAGTA TCAGTATCGC CCAGCTGTCA
GGCTTACAAC TGGTGATTTA CGATGCGTAT CGCCCACAAC AAGCACAGGC GATGTTGTGG
CAAGCCTGCC CAGACCCGCA ATATGTTGTT GATGTGGCGG TCGGTTCTAA TCACAGCCGT
GGCACGGCGA TCGACCTGAC GCTTCGTGAT GAGCACGGGA ACATACTGGA TATGGGTGCA
GAGTTCGATG AAATGCACGA ACGTTCCCAT GCTTATCACC CTTCCGTCCC GCCAGCCGCT
CAGCGCAATC GGCTGTTGCT GAATGCGATT ATGACTGGCG GTGGCTTTGT CGGTATCCCG
AGCGAATGGT GGCACTTCGA ATTACCCCAG GCAGCGAGTT ACCCACTACT CGCTGATCAA
TTCACCTGTT TTATATCCCC TGGCACACAG CACGCCAGTT AA
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| Protein sequence | MSDTTELVDL AVTFPDLEIE LKYACADNIT GKAIYQQARC LLHKDAITAL AKSISIAQLS
GLQLVIYDAY RPQQAQAMLW QACPDPQYVV DVAVGSNHSR GTAIDLTLRD EHGNILDMGA
EFDEMHERSH AYHPSVPPAA QRNRLLLNAI MTGGGFVGIP SEWWHFELPQ AASYPLLADQ
FTCFISPGTQ HAS
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