| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_1680 |
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| Symbol | gadA |
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| ID | 6145213 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | + |
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| Start bp | 1680092 |
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| End bp | 1681492 |
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| Gene Length | 1401 bp |
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| Protein Length | 466 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 641616556 |
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| Product | glutamate decarboxylase GadA |
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| Protein accession | YP_001743734 |
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| Protein GI | 170680042 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0076] Glutamate decarboxylase and related PLP-dependent proteins |
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| TIGRFAM ID | [TIGR01788] glutamate decarboxylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 61 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATAAGA AGCAAGTAAC GGATTTAAGG TCGGAACTAC TCGATTCACG TTTTGGTGCA
AAGTCTATTT CCACTATCGC AGAATCAAAA CGTTTTCCGC TGCACGAAAT GCGCGACGAT
GTCGCATTTC AGATTATCAA TGACGAATTA TATCTTGATG GCAACGCTCG TCAGAACCTG
GCCACTTTCT GCCAGACCTG GGACGACGAA AACGTCCACA AGTTGATGGA TTTATCCATT
AACAAAAACT GGATCGACAA AGAAGAATAT CCGCAATCCG CAGCCATCGA CCTGCGTTGC
GTAAACATGG TTGCCGATCT GTGGCATGCG CCTGCGCCGA AAAATGGTCA GGCCGTTGGC
ACCAACACCA TTGGTTCTTC CGAGGCCTGT ATGCTTGGCG GGATGGCGAT GAAATGGCGT
TGGCGCAAGC GTATGGAAGC TGCAGGCAAA CCAACGGATA AACCAAACCT GGTGTGCGGT
CCGGTGCAAA TCTGCTGGCA TAAATTCGCC CGCTACTGGG ATGTGGAGTT GCGTGAGATC
CCTATGCGCC CCGGTCAGTT GTTTATGGAC CCGAAACGCA TGATTGAAGC CTGCGACGAA
AATACCATCG GCGTGGTGCC GACTTTCGGC GTGACCTACA CCGGTAACTA TGAGTTCCCG
CAGCCGCTGC ACGATGCGCT GGATAAATTC CAGGCCGACA CCGGTATCGA CATCGACATG
CACATCGACG CCGCCAGCGG TGGCTTCCTG GCACCGTTCG TCGCCCCGGA TATCGTCTGG
GACTTCCGCC TGCCGCGTGT GAAATCGATC AGTGCTTCAG GCCATAAATT CGGTCTGGCT
CCGCTGGGCT GCGGCTGGGT TATCTGGCGT GATGAAGAAG CGCTGCCGCA GGAACTGGTG
TTCAACGTTG ACTACCTCGG CGGTCAGATT GGGACTTTCG CCATCAACTT CTCCCGCCCG
GCGGGTCAGG TGATTGCACA GTACTATGAA TTCCTGCGCC TCGGTCGTGA AGGCTATACC
AAAGTACAGA ACGCTTCCTA CCAGGTTGCC GCTTATCTGG CGGATGAAAT CGCCAAACTG
GGACCGTATG AGTTTATCTG TACCGGTCGC CCGGACGAAG GCATCCCGGC GGTTTGCTTC
AAACTGAAAG ATGGTGAAGA TCCGGGATAC ACCCTCTACG ACCTCTCTGA ACGTCTGCGT
CTGCGCGGCT GGCAGGTTCC GGCCTTCACT CTCGGCGGTG AAGCCACTGA CATCGTGGTG
ATGCGCATTA TGTGTCGTCG CGGCTTCGAA ATGGACTTTG CTGAACTGTT GCTGGAAGAC
TACAAAGCCT CCCTGAAATA TCTCAGCGAT CACCCGAAAC TGCAGGGTAT TGCCCAGCAG
AACAGCTTTA AACATACCTG A
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| Protein sequence | MDKKQVTDLR SELLDSRFGA KSISTIAESK RFPLHEMRDD VAFQIINDEL YLDGNARQNL
ATFCQTWDDE NVHKLMDLSI NKNWIDKEEY PQSAAIDLRC VNMVADLWHA PAPKNGQAVG
TNTIGSSEAC MLGGMAMKWR WRKRMEAAGK PTDKPNLVCG PVQICWHKFA RYWDVELREI
PMRPGQLFMD PKRMIEACDE NTIGVVPTFG VTYTGNYEFP QPLHDALDKF QADTGIDIDM
HIDAASGGFL APFVAPDIVW DFRLPRVKSI SASGHKFGLA PLGCGWVIWR DEEALPQELV
FNVDYLGGQI GTFAINFSRP AGQVIAQYYE FLRLGREGYT KVQNASYQVA AYLADEIAKL
GPYEFICTGR PDEGIPAVCF KLKDGEDPGY TLYDLSERLR LRGWQVPAFT LGGEATDIVV
MRIMCRRGFE MDFAELLLED YKASLKYLSD HPKLQGIAQQ NSFKHT
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