| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_1674 |
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| Symbol | |
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| ID | 6144978 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | + |
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| Start bp | 1668451 |
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| End bp | 1669212 |
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| Gene Length | 762 bp |
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| Protein Length | 253 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 641616550 |
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| Product | transcriptional regulator YdeO |
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| Protein accession | YP_001743728 |
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| Protein GI | 170680428 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 50 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGCTCG TTTGTTCTGT TATATTTATT CATCATGCCT TCAACGCTAA CATTTTAGAT
AAAGATTACG CCTTCTCTGA CGGCGAGATC CTGATGGTAG ATAACGCTGT TCGTACGCAT
TTTGAACCTT ATGAGCGGCA TTTCAAAGAA ATCGGATTTA ATGAAAACAC CATTAAAAAA
TATCTACAAT GCACTAACAT CCAGACAGTG ACGGTGCCTG TTCCTGCGAA GTTTTTACGT
GCTTCAAATG TACCGACGGG ATTGCTTAAT GAAATGATTG CTTATCTCAA CTCGGAAGAA
CGCAATCATC ATAACTTTTC AGAACTTTTG CTTTTTTCTT GCCTGTCTAT TTTTGCCGCA
TGCAAAGGTT TCATTACACT ATTAACTAAC GGTGTGCTAT CCGTTTCCGG GAAAGTGAGA
AATATTGTCA ACATGAAGCT GGCGCACCCA TGGAAGCTGA AAGATATTTG TGACTGCCTG
TACATCAGTG AAAGCCTGTT GAAGAAAAAA CTAAAGCAAG AGCAAACGAC ATTCTCACAG
ATTCTTTTAG ATGCCAGAAT GCAGCACGCA AAAAATTTGA TACGCGTAGA AGGTTCAGTC
AATAAAATTG CCGAACAATG TGGTTATGCG AGTACATCTT ATTTTATTTA TGCGTTCCGC
AAACATTTCG GCAACAGTCC GAAGAGAGTT TCGAAGGAGT ACCGTTGTCA AAGGCACACC
GGTATGAACA CGGACAACAC GATGAGTGCT TTAGCTATTT GA
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| Protein sequence | MSLVCSVIFI HHAFNANILD KDYAFSDGEI LMVDNAVRTH FEPYERHFKE IGFNENTIKK
YLQCTNIQTV TVPVPAKFLR ASNVPTGLLN EMIAYLNSEE RNHHNFSELL LFSCLSIFAA
CKGFITLLTN GVLSVSGKVR NIVNMKLAHP WKLKDICDCL YISESLLKKK LKQEQTTFSQ
ILLDARMQHA KNLIRVEGSV NKIAEQCGYA STSYFIYAFR KHFGNSPKRV SKEYRCQRHT
GMNTDNTMSA LAI
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