| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_1667 |
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| Symbol | |
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| ID | 6143948 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | + |
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| Start bp | 1661957 |
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| End bp | 1662487 |
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| Gene Length | 531 bp |
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| Protein Length | 176 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 641616543 |
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| Product | protein FimF-like protein |
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| Protein accession | YP_001743721 |
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| Protein GI | 170684138 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3539] P pilus assembly protein, pilin FimA |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 0.554066 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAATACA ATAACGTTAT TTTCCTCGGT TTATGTCTGG GGTTAACCAC CTATTCTGCT
TTATCCGCAG ATAGCGTTAT TAAAATTAGC GGGCGCGTTC TCGATTATGG CTGCACAGTC
TCATCGGATT CGCTTAATTT TACCGTAGAT CTCCAAAAAA ACAGTGCCAG ACAATTTCCA
ACGACCGGTA GCACAAGTCC AGCCGTCCCT TTTCAGATTA CATTAAGTGA ATGCAGCAAA
GGGACAACGG GAGTTCGGGT TGCATTTAAC GGTATTGAGG ATGCAGAAAA TAATACTCTG
TTGAAACTGG ATGAAGGAAG CAATACGGCC TCCGGTTTGG GTATAGAAAT ACTGGACGGA
AATATGCGTC CGGTGAAATT GAATGACCTT CATGCCGGGA TGCAGTGGAT CCCATTGGTA
CCAGAACAGA ACAATATTTT GCCTTACTCC GCTCGTTTGA AGTCAACTCA GAAGTCCGTC
AATCCTGGAC TGGTGAGCGC TTCGGCAACC TTTACCCTTG AATTTCAATA A
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| Protein sequence | MKYNNVIFLG LCLGLTTYSA LSADSVIKIS GRVLDYGCTV SSDSLNFTVD LQKNSARQFP
TTGSTSPAVP FQITLSECSK GTTGVRVAFN GIEDAENNTL LKLDEGSNTA SGLGIEILDG
NMRPVKLNDL HAGMQWIPLV PEQNNILPYS ARLKSTQKSV NPGLVSASAT FTLEFQ
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