| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_1661 |
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| Symbol | lsrK |
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| ID | 6144365 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | + |
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| Start bp | 1649413 |
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| End bp | 1651005 |
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| Gene Length | 1593 bp |
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| Protein Length | 530 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 641616537 |
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| Product | autoinducer-2 (AI-2) kinase |
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| Protein accession | YP_001743715 |
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| Protein GI | 170683577 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1070] Sugar (pentulose and hexulose) kinases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 0.68331 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTCGAC TCTTTACCCC TTCAGAATCA AAGTACTACC TGATGGCGCT GGATGCAGGC
ACCGGAAGTA TTCGGGCTGT GATATTCGAC CTGGAAGGCA ATCAAATAGC CGTGGGACAG
GCGGAGTGGC GGCATCTGGC AGTACCGGAC GTTCCTGGTT CTATGGAATT TGATCTCAAC
AAAAACTGGC AACTGGCGTG TGAGTGTATG CGCCAGGCGC TGCACAACGC CGGCATAGCC
CCGGAGTATA TCGCTGCCGT TTCGGCATGT TCGATGCGTG AAGGCATTGT TTTATATAAC
AATGATGGAA CACCGATCTG GGCCTGCGCC AATGTGGATG CCAGAGCGGC GCGCGAAGTT
AGCGAACTTA AAGAACTGCA CAACAATACC TTTGAAAACA AAGTTTATCG AGCGACCGGG
CAAACGCTGG CTTTAAGCGC CATCCCCAGA TTACTTTGGC TGGCGCACCA TCGTTCCGAT
ATCTACCGAC AGGCGTCGAC CATCACCATG ATCAGCGACT GGCTGGCCTA TATGCTCAGC
GGCGAACTGG CGGTGGATCC CTCTAACGCT GGCACCACGG GACTTCTTGA TCTAACCACC
CGTGACTGGA AACCTGCATT GCTGGATATG GCTGGCCTGC GTGCCGATAT TCTTTCTCCT
GTCAAAGAAA CCGGCACATT GCTGGGCGTG GTAAGTTCAC ACGCGGCGGA GCTCTGCGGT
CTGAAGGCGG GCACTCCGGT GGTCGTTGGA GGAGGTGACG TGCAGCTTGG TTGCCTGGGG
TTAGGCGTTG TACGTCCGGC ACAAACCGCG GTTCTTGGCG GCACATTCTG GCAGCAAGTT
GTAAACTTAG CCGCGCCGGT GACAGACCCA GAAATGAACG TGCGCGTTAA TCCCCATGTT
ATTCCTGGCA TGGTACAAGC TGAATCTATA AGCTTTTTTA CCGGACTCAC CATGCGCTGG
TTCCGCGATG CTTTCTGTGC CGAAGAAAAA CTGATTGCCG AACGTTTAGG CATCGACACC
TATACGCTGC TTGAAGAGAT GGCAAGTCGT GTGCCGCCTG GGTCGTGGGG CGTAATGCCG
ATATTCTCCG ACAGAATGCG CTTTAAAACC TGGTATCACG CTGCGCCTTC CTTTATTAAC
TTGTCCATTG ACCCGGATAA ATGTAACAAA GCGACATTGT TCCGTGCGCT GGAAGAAAAT
GCGTCGATTG TATCAGCGTG TAACTTGCAG CAAATTGCTG ATTTTTCGAA TATTCATCCC
ACATCTCTGG TCTTTGCAGG CGGAGGTTCA AAAGGGAAAT TATGGAGTCA AATTCTCGCT
GATGTCTCGG GATTACCCGT CAATATTCCG GTGGTCAAAG AAGCCACTGC ATTAGGATGT
GCCATTGCAG CTGGCGTCGG TGCCGGAATT TTTTCATCAA TGGCAGAAAC CGGAGAACGC
CTGGTTCGCT GGGAACGGAC GCACACACCA GACCCAGAAA AGCATGAACT TTATCAGGAT
TCACGCGATA AGTGGCAGGC AGTTTATCAG GATCAGCTGG GGCTGGTTGA TCATGGACTG
ACGACGTCGT TATGGAAAGC GCCTGGGTTA TAG
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| Protein sequence | MARLFTPSES KYYLMALDAG TGSIRAVIFD LEGNQIAVGQ AEWRHLAVPD VPGSMEFDLN
KNWQLACECM RQALHNAGIA PEYIAAVSAC SMREGIVLYN NDGTPIWACA NVDARAAREV
SELKELHNNT FENKVYRATG QTLALSAIPR LLWLAHHRSD IYRQASTITM ISDWLAYMLS
GELAVDPSNA GTTGLLDLTT RDWKPALLDM AGLRADILSP VKETGTLLGV VSSHAAELCG
LKAGTPVVVG GGDVQLGCLG LGVVRPAQTA VLGGTFWQQV VNLAAPVTDP EMNVRVNPHV
IPGMVQAESI SFFTGLTMRW FRDAFCAEEK LIAERLGIDT YTLLEEMASR VPPGSWGVMP
IFSDRMRFKT WYHAAPSFIN LSIDPDKCNK ATLFRALEEN ASIVSACNLQ QIADFSNIHP
TSLVFAGGGS KGKLWSQILA DVSGLPVNIP VVKEATALGC AIAAGVGAGI FSSMAETGER
LVRWERTHTP DPEKHELYQD SRDKWQAVYQ DQLGLVDHGL TTSLWKAPGL
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