| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_1660 |
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| Symbol | lsrR |
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| ID | 6143880 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | + |
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| Start bp | 1648381 |
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| End bp | 1649334 |
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| Gene Length | 954 bp |
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| Protein Length | 317 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 641616536 |
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| Product | transcriptional repressor LsrR |
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| Protein accession | YP_001743714 |
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| Protein GI | 170680199 |
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| COG category | [K] Transcription |
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| COG ID | [COG2390] Transcriptional regulator, contains sigma factor-related N-terminal domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 47 |
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| Fosmid unclonability p-value | 0.853311 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAATCA ACGATTCGGT AATTTCAGAA CAGGGAATGT GTGAAGAAGA ACAGGTCGCA
CGGATTGCGT GGTTTTACTA CCACGACGGG CTGACCCAGA GTGAGATCAG CGATCGTCTC
GGCCTGACCC GTTTGAAAGT GTCGCGATTA CTGGAGAAAG GGCATCAATC CGGCATTATT
CGCGTACAGA TTAATTCACG CTTTGAAGGC TGTCTGGAAT ATGAAACACA ATTATGTCGT
CAGTTTTCGC TGCAACATGT CCGGGTGATC CCAGGGCTTG CGGATGCTGA TGTCGGCGGG
CGACTAGGGA TAGGCGCGGC GCATATGTTG ATGAGTTTAC TTCAACCACA ACAGATGCTG
GCGATTGGTT TTGGCGAGGC AACCATGAAT ACGCTGCAAC GCTTAAGTGG TTTTATTTCG
TCACAGCAAA TTCGCCTGGT CACGCTCTCC GGTGGAGTCG GTTCTTATAT GACGGGTATC
GGGCAGCTTA ACGCGGCGTG CAGTGTGAAT ATTATTCCGG CTCCGTTGCG GGCATCCTCC
GCTGACATTG CCCATACGCT AAAAAATGAA AATTGCGTCA AAGATGTTCT GCTAGCCGCA
CAAGCTGCGG ATGTGGCGAT TGTCGGCATT GGGGCCGTGA GTCAACAAGA CGACGCGACG
ATCATTCGCT CCGGTTATAT CAGCCAGGGC GAACAGTTAA TGATTGGTCG AAAAGGGGCG
GTTGGCGACA TTTTAGGCTA CTTTTTTGAT GCAAAAGGTG ACGTTGTCAC GGATATTAAA
ATACATAACG AACTGATTGG CTTACCTTTA AGCGCGCTGA AGACCATACC CGTCCGGGTT
GGCGTGGCAG GGGGAGAAAA TAAAGCCGAA GCAATTGCCG CTGCAATGAA AGGCGGTTAT
ATCAACGCAC TGGTTACCGA TCAGGATACA GCAGCGGCGA TTTTACGTAG TTAA
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| Protein sequence | MTINDSVISE QGMCEEEQVA RIAWFYYHDG LTQSEISDRL GLTRLKVSRL LEKGHQSGII
RVQINSRFEG CLEYETQLCR QFSLQHVRVI PGLADADVGG RLGIGAAHML MSLLQPQQML
AIGFGEATMN TLQRLSGFIS SQQIRLVTLS GGVGSYMTGI GQLNAACSVN IIPAPLRASS
ADIAHTLKNE NCVKDVLLAA QAADVAIVGI GAVSQQDDAT IIRSGYISQG EQLMIGRKGA
VGDILGYFFD AKGDVVTDIK IHNELIGLPL SALKTIPVRV GVAGGENKAE AIAAAMKGGY
INALVTDQDT AAAILRS
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