| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_1655 |
|---|
| Symbol | lsrF |
|---|
| ID | 6146914 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli SMS-3-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010498 |
|---|
| Strand | - |
|---|
| Start bp | 1642647 |
|---|
| End bp | 1643522 |
|---|
| Gene Length | 876 bp |
|---|
| Protein Length | 291 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 641616531 |
|---|
| Product | aldolase |
|---|
| Protein accession | YP_001743709 |
|---|
| Protein GI | 170682465 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1830] DhnA-type fructose-1,6-bisphosphate aldolase and related enzymes |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 50 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCAGATT TAGACGATAT TAAAGATGGT AAGGATTTTC GTACCGATCA ACCGCAACAA
AATATCCCTT TTACCCTGAA AGGTTGCGGT GCACTGGATT GGGGAATGCA GTCACGCTTA
TCGCGGATAT TTAATTCGAA AACGGGTAAA ACCGTGATGC TGGCTTTTGA TCATGGTTAT
TTTCAGGGGC CGACTACCGG ACTTGAACGC ATTGATATAA GTATCGCCCC GCTGTTTGAA
CATGCCGATG TATTAATGTG TACGCGCGGC ATTTTGCGCA GCGTAGTCCC CCCTGCGACC
AATAAGCCGG TGGTACTGCG GGCGTCTGGT GCGAACTCTA TTCTGGCGGA ATTAAGTAAT
GAAGCCGTGG CGTTATCGAT GGATGACGCC GTGCGCCTGA ACAGTTGCGC GGTGGCGGCG
CAGGTTTATA TCGGCAGCGA ATATGAACAT CAGTCGATCA AAAATATTAT TCAGCTGGTC
GATGCCGGAA TGAAAGTGGG AATGCCGACC ATGGCCGTGA CAGGCGTGGG CAAAGATATG
GTGCGCGATC AGCGTTATTT CTCGCTCGCG ACTCGAATCG CCGCTGAAAT GGGGGCGCAA
ATTATCAAAA CCTATTATGT CGATAAAGGT TTTGAACGGA TTGTTGCCGG ATGTCCGGTA
CCCATTGTTA TTGCTGGCGG TAAAAAATTA CCGGAGCGCG AGGCGCTGGA AATGTGCTGG
CAGGCTATCG ATCAGGGCGC TTCTGGTGTG GATATGGGGC GTAATATTTT CCAGTCTGAC
CATCCGGTGG CGATGATGAA AGCCGTACAG GCGGTGGTTC ACCATAACGA AACGGCTGAT
CGGGCATATG AACTCTATCT GAGTGAAAAA CAGTAA
|
|---|
| Protein sequence | MADLDDIKDG KDFRTDQPQQ NIPFTLKGCG ALDWGMQSRL SRIFNSKTGK TVMLAFDHGY
FQGPTTGLER IDISIAPLFE HADVLMCTRG ILRSVVPPAT NKPVVLRASG ANSILAELSN
EAVALSMDDA VRLNSCAVAA QVYIGSEYEH QSIKNIIQLV DAGMKVGMPT MAVTGVGKDM
VRDQRYFSLA TRIAAEMGAQ IIKTYYVDKG FERIVAGCPV PIVIAGGKKL PEREALEMCW
QAIDQGASGV DMGRNIFQSD HPVAMMKAVQ AVVHHNETAD RAYELYLSEK Q
|
|---|
| |