Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_1653 |
Symbol | tam |
ID | 6145569 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010498 |
Strand | - |
Start bp | 1641518 |
End bp | 1642276 |
Gene Length | 759 bp |
Protein Length | 252 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 641616529 |
Product | trans-aconitate 2-methyltransferase |
Protein accession | YP_001743707 |
Protein GI | 170681176 |
COG category | [R] General function prediction only |
COG ID | [COG4106] Trans-aconitate methyltransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.217982 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 50 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTGACT GGAACCCCTC TTTATATCTG CACTTTGCCG CTGAACGATC GCGTCCGGCG GTGGAGCTGC TTGCCAGAGT GCCGCTGGAG AATATCAAAT ACGTTGCCGA TCTTGGCTGT GGCCCAGGTA ACAGCACCGC CCTGCTGCAT CAACGTTGGC CTGCGGCCAG GATAACAGGC GTCGACTCAT CTCCGGCGAT GATTGCTGAA GCGCGCAGTG CTTTGCCAGA CTGCCAGTTC GTGGAAGCAG ACATCCGCAA CTGGCAACCG GAACAGGCAC TCGATCTGAT TTTTGCTAAT GCCTCACTGC AATGGCTGCC CGACCACTAC GAATTGTTCC CTCATCTGGT TTCTTTACTT AATTCGCATG GTGTGTTGGC AGTACAGATG CCAGATAACT GGCTAGAGCC AACCCATGTG CTCATGCGCG AAGTCGCCTG GGAACAAAAT TATCCGGATC GCGGGCGTGA GCCGCTGGCT GGCGTTCATG CTTACTACGA TATTTTGAGC GAAGCCGGAT GTGAGGTCGA TATCTGGCGA ACCACTTACT ATCACCAGAT GCCGTCGCAC CAGGCGATTA TCGATTGGGT GACCGCCACT GGATTACGTC CGTGGTTACA GGATCTGACC GAGAGCGAAC AGCAGCATTT TCTTACGCGC TACCATCAGA TGCTGGAAGA GCAGTATCCA CTGCAAGAGA ACGGAGAGAT ACTGCTGGCA TTTCCGCGTC TGTTTATTGT TGCCCGCCGT ACGGAGTAA
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Protein sequence | MSDWNPSLYL HFAAERSRPA VELLARVPLE NIKYVADLGC GPGNSTALLH QRWPAARITG VDSSPAMIAE ARSALPDCQF VEADIRNWQP EQALDLIFAN ASLQWLPDHY ELFPHLVSLL NSHGVLAVQM PDNWLEPTHV LMREVAWEQN YPDRGREPLA GVHAYYDILS EAGCEVDIWR TTYYHQMPSH QAIIDWVTAT GLRPWLQDLT ESEQQHFLTR YHQMLEEQYP LQENGEILLA FPRLFIVARR TE
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